PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00049g16059.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 318aa    MW: 35903.8 Da    PI: 4.5419
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00049g16059.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.000122612832855
                               CCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  28 PkaskapskKlsKaeiLekAveYIksLq 55 
                               P     +++K++ +++Le+AveY+k Lq
  Peinf101Scf00049g16059.1 261 P-----NGTKVDISTMLEEAVEYVKFLQ 283
                               3.....569******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.85E-6257296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-5257291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.78E-4257287No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MEPVAAMSRG EWSSFSGMYS TDEEADFMTQ LLHNSSRSNE LPIISSFNFE STMNTNNSMY  60
FSSQESSYNE CSSFPFSHPS HESYYPSHES YYPSHFPSIL MSNDSSITME YSNMVEGEII  120
SSPSNKVLAN NLIEVDDFFN QDVSNDSMES GENMPKDVLQ LERDEKFSQD KVYSPPESSK  180
KRSRLPGDVA KNKRTVKLRK NIESTNEMDG EKKTVLQRKN SMISCCSEDE SNVSHELNGK  240
TRASRGSATD PQSLYARSLV PNGTKVDIST MLEEAVEYVK FLQLQIKLLS SDDLWMYSPI  300
AYNGMDIGLD MKLGMPKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754494e-36HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019255469.11e-125PREDICTED: transcription factor bHLH139-like
TrEMBLA0A1J6HWE31e-124A0A1J6HWE3_NICAT; Transcription factor bhlh84
STRINGXP_009611804.11e-120(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-50bHLH family protein