PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00056g00033.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 165aa    MW: 19256.1 Da    PI: 8.6136
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00056g00033.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.78.7e-1183119339
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 
                               +WT+eE+ l++ + +++G+g+W++I+r +  +Rt+ q
  Peinf101Scf00056g00033.1  83 PWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQ 119
                               7*****************************99*9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.5576129IPR017930Myb domain
SuperFamilySSF466891.87E-1078132IPR009057Homeodomain-like
TIGRFAMsTIGR015577.6E-979119IPR006447Myb domain, plants
SMARTSM007174.5E-580130IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.4E-1081120IPR009057Homeodomain-like
PfamPF002497.1E-983119IPR001005SANT/Myb domain
CDDcd001674.98E-883119No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MKSLAKWLQN RMFYTLNKLP SINRRSCSGK TQQEIISHYD DLVHDVLEID LGRVEPPSYL  60
DVLCDNEISF KKYCEIERKK GIPWTEEEHR LFLIGLEKYG KGDWRSISRN VVVTRTPTQA  120
MKKERKRFSI HDITTAVDTN PVPPQSSFQN KEALKISTLP CKDEE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755171e-34HG975517.1 Solanum lycopersicum chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009795456.13e-62PREDICTED: transcription factor DIVARICATA-like
RefseqXP_016473251.13e-62PREDICTED: transcription factor DIVARICATA-like
SwissprotQ9FNN64e-29SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A1S4A9J27e-61A0A1S4A9J2_TOBAC; transcription factor DIVARICATA-like
TrEMBLA0A1U7Y0L87e-61A0A1U7Y0L8_NICSY; transcription factor DIVARICATA-like
STRINGXP_009795456.11e-61(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.11e-41MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]