PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00056g09008.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

MYB_related

Protein Properties

Length: 183aa MW: 20685.7 Da PI: 8.3214

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00056g09008.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.1e-09	14	43	1	30
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 rg+WT eEd++l+ ++++G ++W++ +r Peinf101Scf00056g09008.1 14 RGPWTSEEDQILISFIQRYGHENWRALPRQ 43 89***********************99886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.3E-12	5	45	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.51E-8	8	45	IPR009057	Homeodomain-like
PROSITE profile	PS50090	7.77	9	49	IPR017877	Myb-like domain
Pfam	PF00249	4.9E-7	14	42	IPR001005	SANT/Myb domain
CDD	cd00167	1.23E-4	16	42	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence Send to blast
MVRAPCCEKM GLKRGPWTSE EDQILISFIQ RYGHENWRAL PRQAASDQTI ANQYPTCHED 60 LQENNSTSDT QANKEESMQP INAQIGHDGD TSISNDMKKA KNQKSCNVKG SRGVDGKAEA 120 VLSLRRSEQW QWQRRGYGDG DDKRGNGSRG VDGKAEAVLS LRRSEQWQWQ RRGYGDGDDK 180 RGN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-22	myb domain protein 15