PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00067g18001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 249aa    MW: 28023.3 Da    PI: 10.1786
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00067g18001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-1271122254
                               HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               +  hn+ Er RR+++N  ++ Lr+llP+a  +++kKls  +++  + eYI +L
  Peinf101Scf00067g18001.1  71 KLRHNASERSRRKKMNFLYSSLRSLLPSA-TQKKKKLSFPATVSFVQEYIPEL 122
                               678*************************7.477777**************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.42769122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1270137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-1070136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.43E-870127No hitNo description
PfamPF000107.4E-1071122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-675128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MVALYSSGFI PTTGGWSLEE VLGDEQNKMI IQNENTDLFK GLHVDNNSSP PSHKQSKGIS  60
DFGEESLMAK KLRHNASERS RRKKMNFLYS SLRSLLPSAT QKKKKLSFPA TVSFVQEYIP  120
ELKKEIERLS QTKNLLLSTV SKKGDLIQRE NQRHTMKGTS STSITASPLC HEQALIQIST  180
TQANGFPISE ALKKLEEDGL LLLNASSFKS FGDKIFHSLH LQMQGPARME LQILKTKLLL  240
MYEKNLNLI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009600422.12e-96PREDICTED: transcription factor ORG2-like
TrEMBLA0A314L3U53e-85A0A314L3U5_NICAT; Transcription factor org3
TrEMBLA0A3Q7IL293e-85A0A3Q7IL29_SOLLC; Uncharacterized protein
STRINGXP_009600422.18e-96(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.19e-34bHLH family protein