PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00073g09020.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 293aa MW: 33023 Da PI: 8.6633

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00073g09020.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.4	0.00029	223	255	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++ L +l+ + +K + a++L++A+ YI+ Lq Peinf101Scf00073g09020.1 223 DRISALHRLVAPF-----GKTDSASVLTEAIGYIQFLQ 255 7788888888887.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	9.966	205	254	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	7.07E-9	218	267	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	0.00136	219	258	No hit	No description
Gene3D	G3DSA:4.10.280.10	9.3E-7	219	263	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence Send to blast
MDSTNLYQHH LIQQQLAAYP FLTGISTIHD WDPSMTSEEE YSYYKGKEEL RERSIDTYSS 60 SIKTPILHDG HQINYSNMNC LNDNSFKEQY AFDLNENFLS NEVYMNNSKT CNGLFGGFSA 120 AATSNYISSR EYSNFQDPKF SFNSITYNNS TGDSTSIVGL PELIHCPANK KKPVVGNNIG 180 DSSKAKRLNY NAKITSQEAS KKPRVTLHSS SPMLKVQKEK LGDRISALHR LVAPFGKTDS 240 ASVLTEAIGY IQFLQHQILT LSMPYTKSSH GKLHQINLKN GQKPPFSVYV QIY

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009624505.1	1e-98	PREDICTED: transcription factor bHLH110-like isoform X2
TrEMBL	A0A1S4BLL7	2e-91	A0A1S4BLL7_TOBAC; transcription factor bHLH110-like
TrEMBL	A0A1U7Y6V8	2e-91	A0A1U7Y6V8_NICSY; transcription factor bHLH110-like
STRING	XP_009624505.1	5e-98	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13443	12	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	8e-29	bHLH family protein