PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00099g02018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 565aa    MW: 64172.3 Da    PI: 5.0473
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00099g02018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.42.3e-56151431129
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                               lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyW
  Peinf101Scf00099g02018.1  15 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPdKsLLPSKDMEWYFFSPRDRKYPNGTRTNRATKAGYW 98 
                               79****************************.99**************96435566888*************************** PP

                       NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                               katgkd++v s + + +g+kktLv+y+grap+g++t Wvmheyrle
  Peinf101Scf00099g02018.1  99 KATGKDRKVNS-QMRPIGMKKTLVYYRGRAPHGTRTGWVMHEYRLE 143
                               **********9.999*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.02E-649165IPR003441NAC domain
PROSITE profilePS5100561.60115165IPR003441NAC domain
PfamPF023653.7E-3016142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    Send to blast
EVPKEKYIHM APVSLPPGFR FHPTDEELVA YYLKRKINGR KIELEVIPEV DLYKCEPWDL  60
PDKSLLPSKD MEWYFFSPRD RKYPNGTRTN RATKAGYWKA TGKDRKVNSQ MRPIGMKKTL  120
VYYRGRAPHG TRTGWVMHEY RLEERECEVA NGLQDAYALC RVFKKSLNAQ KSGDHYASAV  180
SDRSSSIDLY TDQGRYDDYN ESSSNYGIMP SAATSSSMVR VHGSPLNHDI AGPSDDKWMQ  240
YLSDEAFTFN NPSLTNNGTL PYLPSKVDIA LECARLQHRF ALPPLEVQDF PQVGYVDSRN  300
MYSQSNDLIY QSTNQTDIVQ EILSVAQASH DLTNQDSSWG GNYNYAAPVG DDFSFLPHNN  360
QIHGFGNFDE DFKSESMVEK LRWVGMSEND IEKTFLEDYK TVPIENISGP HKEAEQELQG  420
EGSGQQNDFN ELNETDGGNN LSLGFGNDSF LDNDEDTDGT FSSSPSFEVY EKIEVSQGMF  480
NIATRQAANT FYHRVVPSRT VKIQRNLVTM HDSKAISQDA TFLDTFMAFS RKTLSGVMKV  540
TWPWRGTVST LVDMIAPLYS FFGVF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-571017112171NO APICAL MERISTEM PROTEIN
1ut4_B7e-571017112171NO APICAL MERISTEM PROTEIN
1ut7_A7e-571017112171NO APICAL MERISTEM PROTEIN
1ut7_B7e-571017112171NO APICAL MERISTEM PROTEIN
3swm_A9e-571017115174NAC domain-containing protein 19
3swm_B9e-571017115174NAC domain-containing protein 19
3swm_C9e-571017115174NAC domain-containing protein 19
3swm_D9e-571017115174NAC domain-containing protein 19
3swp_A9e-571017115174NAC domain-containing protein 19
3swp_B9e-571017115174NAC domain-containing protein 19
3swp_C9e-571017115174NAC domain-containing protein 19
3swp_D9e-571017115174NAC domain-containing protein 19
4dul_A7e-571017112171NAC domain-containing protein 19
4dul_B7e-571017112171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00212DAPTransfer from AT1G65910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754416e-92HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009765145.10.0PREDICTED: NAC domain-containing protein 78-like
RefseqXP_016466987.10.0PREDICTED: NAC domain-containing protein 86-like
TrEMBLA0A1S3ZRK80.0A0A1S3ZRK8_TOBAC; NAC domain-containing protein 86-like
TrEMBLA0A1U7VT990.0A0A1U7VT99_NICSY; NAC domain-containing protein 78-like
STRINGXP_009765145.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14952348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-149NAC domain containing protein 28