PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00101g01037.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 223aa    MW: 25843.5 Da    PI: 9.4805
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00101g01037.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.91.3e-11117203180
                               EEEE-..-HHHHT.T-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS
                        B3   1 ffkvltpsdvlks.grlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78 
                               f+k+lt+sdv ++ grl l ++ +++       +++ +++++++  d+ g  +e++++ +++ +++vl + W++F+k+++Lke D
  Peinf101Scf00101g01037.1 117 FVKQLTKSDVDEHqGRLLLNNEDVRREllpllsNEDLASGIKVKTFDQLGHCYEMTFKTWGNYKTHVLLGSWRQFCKDHELKEHD 201
                               99**********9899********999***99955666899999999***999999988************************** PP

                               EE CS
                        B3  79 fv 80 
                                v
  Peinf101Scf00101g01037.1 202 CV 203
                               86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023622.2E-7117203IPR003340B3 DNA binding domain
SuperFamilySSF1019364.71E-16117203IPR015300DNA-binding pseudobarrel domain
CDDcd100174.43E-15117203No hitNo description
Gene3DG3DSA:2.40.330.102.0E-15117203IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MELGKEDISA ALLLSWLKYT KITEQDVQSF ETILQKHSHS LNPTILEAKK FKKLEKSKRE  60
HLFDKNQQTP QTPKACSTRN YKTSPKKIKI SQNSTEFPRF PPVENLEGLI GKCSNPFVKQ  120
LTKSDVDEHQ GRLLLNNEDV RRELLPLLSN EDLASGIKVK TFDQLGHCYE MTFKTWGNYK  180
THVLLGSWRQ FCKDHELKEH DCVNGYAYYT PQLQRPKTKS SNS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006353478.12e-58PREDICTED: B3 domain-containing protein At1g05920-like
TrEMBLA0A314KM321e-59A0A314KM32_NICAT; Putative b3 domain-containing protein
STRINGPGSC0003DMT4000009916e-58(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64301214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20600.14e-16B3 family protein