PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00113g02010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 231aa    MW: 26463.1 Da    PI: 9.1124
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00113g02010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.83.4e-151480146
                              TSSS-HHHHHHHHHHHHHTTTT......................-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg......................tWktIartmgkgRtlkqcksrwqk 46
                              +g+W +eEd ll ++++++G g                      +W++Ia +++ gRt++++k++w++
  Peinf101Scf00113g02010.1 14 KGAWAEEEDILLRKCIEKYGEGkwhqvpvradyllikivsffftRWSLIAGRLP-GRTANDVKNYWNT 80
                              799***************************************************.***********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.724986IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-81242IPR009057Homeodomain-like
SuperFamilySSF466897.35E-141378IPR009057Homeodomain-like
SMARTSM007171.6E-101384IPR001005SANT/Myb domain
CDDcd001672.29E-91680No hitNo description
Gene3DG3DSA:1.10.10.604.9E-124582IPR009057Homeodomain-like
PfamPF002491.4E-74681IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MNTSVFTSSG VLRKGAWAEE EDILLRKCIE KYGEGKWHQV PVRADYLLIK IVSFFFTRWS  60
LIAGRLPGRT ANDVKNYWNT QLLRRSNFAP PQQHQRKCTK AIKIMAKNVI IRPQPRNLSK  120
LAKNNVSNYS TIHKDEHSKQ KMFIEKPTAA EVVSRDNNVE WWTNLLLDNC NGFEKAAPES  180
TSAVKNIESL LNEELLSTSI NGGTNYPMQE TGDMGWSDFS IDSDLWELLL Q
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1, or BHLH042/TT8. {ECO:0000269|PubMed:15361138}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ4281090.0HQ428109.1 Petunia x hybrida cultivar W59 DEEP PURPLE gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240653.18e-60PREDICTED: transcription factor MYB113-like
RefseqXP_019240654.18e-60PREDICTED: transcription factor MYB113-like
SwissprotQ9FNV96e-28MY113_ARATH; Transcription factor MYB113
TrEMBLE9N6701e-153E9N670_PETHY; DEEP PURPLE
STRINGXP_009626596.17e-57(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.13e-30myb domain protein 113
Publications ? help Back to Top
  1. Li T, et al.
    Jasmonic acid enhancement of anthocyanin accumulation is dependent on phytochrome A signaling pathway under far-red light in Arabidopsis.
    Biochem. Biophys. Res. Commun., 2014. 454(1): p. 78-83
    [PMID:25450360]
  2. Mondal SK,Roy S
    Genome-wide sequential, evolutionary, organizational and expression analyses of phenylpropanoid biosynthesis associated MYB domain transcription factors in Arabidopsis.
    J. Biomol. Struct. Dyn., 2018. 36(6): p. 1577-1601
    [PMID:28490275]