PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00113g04004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 172aa    MW: 19432.6 Da    PI: 4.6335
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00113g04004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14.2e-081947129
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                              +g+WT+eEd ll ++++++G g W+ ++ 
  Peinf101Scf00113g04004.1 19 KGAWTEEEDVLLRKCIEKFGEGKWHQVPV 47
                              79**********************99975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.7371456IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.4E-91748IPR009057Homeodomain-like
SuperFamilySSF466892.94E-71848IPR009057Homeodomain-like
PfamPF002491.4E-61946IPR001005SANT/Myb domain
CDDcd001673.33E-52145No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
CDPHIMNTTI PKSSGLVRKG AWTEEEDVLL RKCIEKFGEG KWHQVPVRAV RPRPRTFSNS  60
AQNISWCSNK SITNSTIDTD GSNNECIRIN DKKPMAEVSR DDGVQWWTSL LANCNENDEP  120
AVENMSYDKL PSLLHEEISP PMNGGISNCM QEGQSGWDDF SVDIDHLWNL LN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ4281010.0HQ428101.1 Petunia x hybrida cultivar V26 PURPLE HAZE gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240653.14e-37PREDICTED: transcription factor MYB113-like
RefseqXP_019240654.14e-37PREDICTED: transcription factor MYB113-like
TrEMBLE9N6634e-83E9N663_PETHY; PURPLE HAZE
STRINGXP_009626596.11e-32(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66380.18e-11myb domain protein 114