PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00120g15004.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

GeBP

Protein Properties

Length: 408aa MW: 43941.1 Da PI: 5.1621

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00120g15004.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	110.8	9e-35	89	192	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkep 78 klfqrlw+++Dei lLqG++d++ ++g+ + + d++afy+++k++ +++++k+qlveK+rrLKkK+++ ++k++sgke+ Peinf101Scf00120g15004.1 89 KLFQRLWTDDDEIELLQGFLDYTRQRGAngsssqhQHHYDTTAFYDQIKNKFQLDFNKNQLVEKLRRLKKKYRTVMSKMASGKEF 173 579**********************9887754333449***************************************** PP DUF573 79 sfskehdqkifelskkiWg 97 +f+++hdq +fe+s++iW+ Peinf101Scf00120g15004.1 174 VFKSAHDQITFEISRQIWN 192 ****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	7.6E-32	91	192	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence Send to blast
MPNKPNNLAD HQNQHLYDDD VDVIDDDDDS TSSPSLAGEV TIAVTGGGGG DTSPPSLPPE 60 PKRPRLEDFT VPVALPVQEK KPPFDDSRKL FQRLWTDDDE IELLQGFLDY TRQRGANGSS 120 SQHQHHYDTT AFYDQIKNKF QLDFNKNQLV EKLRRLKKKY RTVMSKMASG KEFVFKSAHD 180 QITFEISRQI WNNLGSAVRG GGGGGGGGGG GAGGDGGFDD DDAHLNPSPN PNANSMVVYS 240 PNFNLNSNPN GIDSTETPRP LKRCGGVAAN TGAVKVEQKS GGSTTTNVVT PMVNSTTPVA 300 AAGAAATAAP MLPSLIEETV RNCVSPIFKE LLNSVANMNG SRGLGLGGMA MSPIPLGFGG 360 GGAMSMEMMG DEKWRKQQML ELEVYSKRLE LVQDQIKAQL EELRKMGD

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence Send to blast

MPNKPNNLAD HQNQHLYDDD VDVIDDDDDS TSSPSLAGEV TIAVTGGGGG DTSPPSLPPE  60
PKRPRLEDFT VPVALPVQEK KPPFDDSRKL FQRLWTDDDE IELLQGFLDY TRQRGANGSS  120
SQHQHHYDTT AFYDQIKNKF QLDFNKNQLV EKLRRLKKKY RTVMSKMASG KEFVFKSAHD  180
QITFEISRQI WNNLGSAVRG GGGGGGGGGG GAGGDGGFDD DDAHLNPSPN PNANSMVVYS  240
PNFNLNSNPN GIDSTETPRP LKRCGGVAAN TGAVKVEQKS GGSTTTNVVT PMVNSTTPVA  300
AAGAAATAAP MLPSLIEETV RNCVSPIFKE LLNSVANMNG SRGLGLGGMA MSPIPLGFGG  360
GGAMSMEMMG DEKWRKQQML ELEVYSKRLE LVQDQIKAQL EELRKMGD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975513	9e-41	HG975513.1 Solanum lycopersicum chromosome ch01, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009789456.1	1e-177	PREDICTED: uncharacterized protein LOC104237077
TrEMBL	A0A1S4D151	1e-175	A0A1S4D151_TOBAC; uncharacterized protein LOC107824825
TrEMBL	A0A1U7XII8	1e-175	A0A1U7XII8_NICSY; uncharacterized protein LOC104237077
STRING	XP_009789456.1	1e-176	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4052	24	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	5e-71	DNA-binding storekeeper protein-related transcriptional regulator