PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00122g02023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 244aa    MW: 27394.9 Da    PI: 6.3594
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00122g02023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY734e-2399160258
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.....T---EEEEEE-SSSTTEEEEEEES--SS CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.....gCpvkkkversaedpkvveitYegeHnh 58 
                               +Dgy+WrKYGqK++ g+++pr YYrC+ +      C+++k v+rs+++ +v+e++Y ++H +
  Peinf101Scf00122g02023.1  99 EDGYSWRKYGQKHILGAKYPREYYRCARRksklsCCKATKMVQRSETEASVFEVIYGENHSC 160
                               7*************************98876676799***********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-2390162IPR003657WRKY domain
PROSITE profilePS5081117.98293159IPR003657WRKY domain
SuperFamilySSF1182901.14E-2095162IPR003657WRKY domain
SMARTSM007746.3E-2698162IPR003657WRKY domain
PfamPF031064.9E-2299160IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MGEENCWERE VVITELTKGK ELMCMLQKHL DPMKQDVCQY LSLEIISSYD KALSLLNGTA  60
LSAMSKGKET IIPPPSSSAA KLESPQYVHA RPGEEVPPED GYSWRKYGQK HILGAKYPRE  120
YYRCARRKSK LSCCKATKMV QRSETEASVF EVIYGENHSC GQESKNQNRE LLTKETQVVG  180
RSGGELSDIS QFPEMVSTPN NSFSNSNSLL NITNSDLMTT PTSAHAEWNS SAEDLWTTFF  240
TSLK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-141001591875Disease resistance protein RRS1
5w3x_D4e-141001591875Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016512511.11e-129PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A1S4DGN41e-128A0A1S4DGN4_TOBAC; probable WRKY transcription factor 41
STRINGXP_009793240.11e-124(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA120611123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-24WRKY family protein