PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00122g06027.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 170aa    MW: 18585.3 Da    PI: 4.6334
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00122g06027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding353.3e-111442129
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                              +g+WT+eEde+lv+++k++G  +W++ ++
  Peinf101Scf00122g06027.1 14 KGPWTPEEDEKLVEYIKKHGHTSWRSLPN 42
                              79**********************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.7E-14543IPR009057Homeodomain-like
PROSITE profilePS5129411.755961IPR017930Myb domain
SuperFamilySSF466896.82E-9943IPR009057Homeodomain-like
SMARTSM007170.00381356IPR001005SANT/Myb domain
PfamPF002492.5E-91442IPR001005SANT/Myb domain
CDDcd001676.60E-71640No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MGRTPCCDKK GLKKGPWTPE EDEKLVEYIK KHGHTSWRSL PNLAEIGEAF RKLKKEEKTT  60
CQSPASQESS STKYGSDSGI TTEIDLGLAG SPVAGSNQNE DTKWKNGQPY TENFLQGSDT  120
SSSSGLEDSS ESALQLLLDF PSNNDMSFLG HTDTYNTFPS FLSESSLNCS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006339543.11e-57PREDICTED: myb-related protein Zm38-like
TrEMBLM0ZG363e-56M0ZG36_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000000944e-57(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.12e-22myb domain protein 93