PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00125g05013.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 292aa    MW: 33125.2 Da    PI: 4.4153
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00125g05013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08181224632
                               HHHHHHHHHHHHHHHHHHHCTSCC.C.................. CS
                       HLH   6 nerErrRRdriNsafeeLrellPk.as................k 32 
                                ++ErrRR+r+N++++ Lr+++Pk                   +
  Peinf101Scf00125g05013.1 181 LMAERRRRKRLNDRLSMLRSVVPKiTKfdverrnidtrveincA 224
                               589********************955466666555555555553 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.46E-7175207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.763175247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.1E-6181224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-6182206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MEYYNENGFL LDELLLALRS DSWDTSHVPI EMTDFHYNIN GLNNEYLEEN HFTIPLPCTT  60
TTTTTISSFE EYIELPFDQN LNYSSLISEL FSNTTLEFTD SSNNWQLDTS LFTSSPILEN  120
EVIGNSCSFQ DLEVGNIACK LERAQSIEAQ NVTAPTFNIG LCPEEIKVKT KKQNGQPSKN  180
LMAERRRRKR LNDRLSMLRS VVPKITKFDV ERRNIDTRVE INCAGKSSLL LSTLTTLDLS  240
GQDIQQCVIS CFNDFAMQAS CFEELDAKQG LTNVEDIKQA LFRNAGYGGR CL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183190ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623441.12e-85PREDICTED: transcription factor bHLH93-like
RefseqXP_016490472.12e-85PREDICTED: transcription factor bHLH93-like
TrEMBLA0A1S4BNM45e-84A0A1S4BNM4_TOBAC; transcription factor bHLH93-like
STRINGXP_009623441.19e-85(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7892497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10570.12e-30bHLH family protein