PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00145g08005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ARR-B
Protein Properties Length: 638aa    MW: 70244.6 Da    PI: 4.9918
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00145g08005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like764.9e-24217270155
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               k++++Wt  LH++F+ea++++ G +kA Pk+il+lm+v+gLt+e+v SHLQkYR+
  Peinf101Scf00145g08005.1 217 KAKVVWTDSLHNKFLEAIREI-GFDKAAPKKILDLMNVPGLTRENVSSHLQKYRI 270
                               6799*****************.********************************6 PP
2Response_reg647.4e-22231341109
                               EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEE...EEEST CS
              Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpii...vvtah 80 
                               +l+vdD+ + ++++  +l+k +y +v +++++ +al +l+ k   +Dl++ D+ mp+m+Glel + i++e  +lp++   v++a 
  Peinf101Scf00145g08005.1  23 ILVVDDDVTCLSIVSMMLKKWKY-QVVTVKHPMDALSTLRIKGgcIDLVIADVHMPDMSGLELQQVIAQEF-ELPVVcksVMSAD 105
                               89*********************.9999***********888888**********************8887.5555533389999 PP

                               TTHHHHHHHHHTTESEEEESS--HHHHHH CS
              Response_reg  81 geeedalealkaGakdflsKpfdpeelvk 109
                               ++e ++le lk Ga  f++Kp++ ++l++
  Peinf101Scf00145g08005.1 106 DTEGTILEGLKGGAAFFIVKPISLDDLRD 134
                               99************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.0E-2914138No hitNo description
SuperFamilySSF521723.98E-2720140IPR011006CheY-like superfamily
SMARTSM004481.1E-2121136IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011031.88722140IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.2E-1823134IPR001789Signal transduction response regulator, receiver domain
CDDcd001565.55E-2224137No hitNo description
PROSITE profilePS5129410.255213273IPR017930Myb domain
SuperFamilySSF466896.9E-18215274IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.7E-25216274IPR009057Homeodomain-like
TIGRFAMsTIGR015579.6E-23217270IPR006447Myb domain, plants
PfamPF002492.0E-6220269IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 638 aa     Download sequence    Send to blast
MEVETLVNKF SVADDESVER ISILVVDDDV TCLSIVSMML KKWKYQVVTV KHPMDALSTL  60
RIKGGCIDLV IADVHMPDMS GLELQQVIAQ EFELPVVCKS VMSADDTEGT ILEGLKGGAA  120
FFIVKPISLD DLRDLWQYTA LQRNKKGKNV VLKEIDGSEK SSNCFQKSLH EFRESAPSIS  180
ENGCQEVKQG KSKRRSAKEQ GDADKDNNAD SDTPVKKAKV VWTDSLHNKF LEAIREIGFD  240
KAAPKKILDL MNVPGLTREN VSSHLQKYRI FLQKVSDASS IIQTADRSLA RRAIQSNIAS  300
KGLSNFSQFH QEISGSKQKL INNSSNPNSL IDTYHGGLSF TQQARNHISL SGYGQPELVR  360
GEDNLANTRV NKENLLYRAN QLSIPMEANK NQVRSSVCDD ISTQLMSGTT STQVGARPTG  420
NPANRLSGRN LLALGTNGIA THTTLKGNLN FLHNGIADDQ RFDAEKLSNF TQNKDAEEAS  480
DFLAGIMEFI GKGHDDSDQR LAQEASSLVG LEGEKLFPTI LSDHIDEKTW LPSFVIDVGR  540
GEEVGAVLDP VCNFSVFHNI NATQESRGFG DLGSSFLNQV NRQAHQQQDH IGLTESAEDG  600
VSQLHDVFFS PAESRDEEFL ELMLASSPSE DDQNLDGV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-20213276164ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009603673.10.0PREDICTED: putative two-component response regulator ARR21 isoform X2
TrEMBLA0A1S3XYK00.0A0A1S3XYK0_TOBAC; two-component response regulator ORR24-like isoform X3
TrEMBLA0A1S3XZ880.0A0A1S3XZ88_TOBAC; putative two-component response regulator-like APRR6 isoform X1
STRINGXP_009603673.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32902038
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-56response regulator 2