PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00146g03027.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 1144aa    MW: 130980 Da    PI: 7.7759
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00146g03027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.63e-1589172599
                               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                               +++++++++++l +p  f+++ +g+++e     +  ++g++W+vkl  ++ +    +++GW++F+++++L+ g ++ F+++g++e
  Peinf101Scf00146g03027.1  89 TIKPYSFSQDCLKIPVGFLKHLKGQEHE---HAILRRNGKKWQVKL--NGPR----FEEGWEKFAEEHDLQMGSVLEFRHEGDME 164
                               568999*************777888655...566778*********..6665....9***********************99999 PP

                               E..EEEEE-S CS
                        B3  90 felvvkvfrk 99 
                               f   v+++++
  Peinf101Scf00146g03027.1 165 F--EVSILDS 172
                               9..8888775 PP
2B351.12.4e-16226315397
                               EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                        B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                               + +++s++l++++l++p +f++e+g+ +++  +++++d + rsW + l  + +++ + +++GW++F+ an LkegD ++F+ +  
  Peinf101Scf00146g03027.1 226 TCTMKSYYLSNSCLRVPTPFVRENGLCNRK-CKIMIRD-EQRSWIFSL--NSCGKNTKIGGGWRNFCLANCLKEGDRLMFEIVA- 305
                               67889*******************888655.5999999.779******..99999999***********************876. PP

                               SEE..EEEEE CS
                        B3  88 sefelvvkvf 97 
                               +++ +++k++
  Peinf101Scf00146g03027.1 306 NGEIPMFKFH 315
                               4444677765 PP
3B3491.1e-15348434596
                               -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                        B3   5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                               ++++++l++  l++p++fa+ h  g+ke+   +t++d + rsW++ l    +sg++++++ W +F+ an L+ gD v+F+++ + 
  Peinf101Scf00146g03027.1 348 TMKPYYLANYFLCVPRPFARLHsLGNKEC--AITIND-NQRSWTFSL--HSSSGHTYIGGKWHDFCAANCLRGGDYVMFEMVAN- 426
                               57899999999***********7556566..466555.89*******..*******************************9875. PP

                               EE..EEEE CS
                        B3  89 efelvvkv 96 
                               ++++++k+
  Peinf101Scf00146g03027.1 427 GEKPTLKF 434
                               44456555 PP
4B3383e-124545113499
                               SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                        B3  34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                                +  +  ++g++W+vkl  ++++    + +GW +F+++++L+ g ++vF++++++ef   v++f++
  Peinf101Scf00146g03027.1 454 HEHAILRRNGKEWKVKL--NGHR----FDGGWAKFAEEHDLQLGNVLVFRHERDMEF--EVTIFDS 511
                               345667789********..7777....9**********************9999999..9999986 PP
5B360.14e-19565652395
                               EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                        B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                               + +++s++l+++ l +pk+fa+e+ ++  ++ t+t++d + rsW++ l    +++ +++++GW++F+ an L+egD ++F+ + +
  Peinf101Scf00146g03027.1 565 TCTMKSSYLSNSFLPIPKPFARENRLSD-RNCTITIRD-EQRSWTFSL--YSSGKNTYIGGGWRNFCLANCLEEGDCLMFEIVAN 645
                               6678999999999***********7775.4569**999.679******..88888899***********************8875 PP

                               SEE..EEE CS
                        B3  88 sefelvvk 95 
                                e+++++k
  Peinf101Scf00146g03027.1 646 -EENPMMK 652
                               .4445554 PP
6B346.75.6e-156707451797
                               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                        B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                               ++p +fa+ hg+ + ++  +t++d +  sW++ l    +sg++++++GW++F+ an L egD ++F+++  +++++++k++
  Peinf101Scf00146g03027.1 670 RVPLPFARLHGLRN-KTCAITIKD-KQSSWTFSL--YTSSGHTYIGGGWSDFCAANCLSEGDYIMFEMVA-NGEKPTLKFH 745
                               6899******7774.445788888.778******..9******************************987.4555666654 PP
7B3444.1e-14803885598
                               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                               ++++++ +++ + +p  f+++ +  +++  +  +  +  ++W vk+  ++++    l++GW++F+++ngL+ gDf+vFk++g++e
  Peinf101Scf00146g03027.1 803 TIQHYSINKAYFKIPIGFLKHLK--EHG-DEHAILRRGVNKWLVKV--NGRR----LEEGWQNFAEENGLQLGDFLVFKHEGDME 878
                               56889999999********4443..223.3566677788*******..8888....*************************9999 PP

                               E..EEEEE- CS
                        B3  90 felvvkvfr 98 
                               f   v +f+
  Peinf101Scf00146g03027.1 879 F--EVFIFD 885
                               9..665655 PP
8B359.55.9e-199421028596
                                -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                        B3    5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87  
                                +++++ l+++ l++pk+fa+e+ +++++  t+t++de   sW++ l y++++++ ++++GW eF+ an LkegD ++F+ ++ 
  Peinf101Scf00146g03027.1  942 TIRPYCLSKHFLSIPKQFARENRLNNRR-CTITMTDE-QMSWTFSL-YTNGPNT-YFGRGWHEFCVANCLKEGDRLMFEIVS- 1019
                                5678999***************998766.59**9995.579*****.7777765.6999********************887. PP

                                SEE..EEEE CS
                        B3   88 sefelvvkv 96  
                                +++++v+++
  Peinf101Scf00146g03027.1 1020 NGETPVFRF 1028
                                666678776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086310.729161IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.4E-7651IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.41E-7858IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.7E-2279175IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.89E-1982175IPR015300DNA-binding pseudobarrel domain
CDDcd100171.81E-1484171No hitNo description
PROSITE profilePS5086312.18285173IPR003340B3 DNA binding domain
SMARTSM010192.2E-1386173IPR003340B3 DNA binding domain
PfamPF023622.0E-1289171IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.4E-16221315IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.12E-16223315IPR015300DNA-binding pseudobarrel domain
SMARTSM010195.4E-15224318IPR003340B3 DNA binding domain
PROSITE profilePS5086311.984224317IPR003340B3 DNA binding domain
PfamPF023622.5E-14225317IPR003340B3 DNA binding domain
CDDcd100171.21E-12229315No hitNo description
Gene3DG3DSA:2.40.330.101.6E-16342433IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.22E-17342434IPR015300DNA-binding pseudobarrel domain
CDDcd100175.94E-12343435No hitNo description
PROSITE profilePS5086310.729344437IPR003340B3 DNA binding domain
SMARTSM010196.5E-12345438IPR003340B3 DNA binding domain
PfamPF023622.7E-13348434IPR003340B3 DNA binding domain
CDDcd100172.77E-12434510No hitNo description
SuperFamilySSF1019361.0E-14439514IPR015300DNA-binding pseudobarrel domain
SMARTSM010198.1E-4439512IPR003340B3 DNA binding domain
PfamPF023627.9E-9448511IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.0E-15449514IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.533458512IPR003340B3 DNA binding domain
SuperFamilySSF1019365.1E-19561654IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.9E-19562654IPR015300DNA-binding pseudobarrel domain
SMARTSM010194.3E-17563657IPR003340B3 DNA binding domain
PROSITE profilePS5086312.971563656IPR003340B3 DNA binding domain
PfamPF023623.0E-17564653IPR003340B3 DNA binding domain
CDDcd100171.67E-15568656No hitNo description
SMARTSM010193.9E-10663748IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.1E-13667742IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.67E-14669744IPR015300DNA-binding pseudobarrel domain
CDDcd100173.65E-13670746No hitNo description
PfamPF023623.9E-13670745IPR003340B3 DNA binding domain
PROSITE profilePS5086310.743671748IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-20795889IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.28E-18797889IPR015300DNA-binding pseudobarrel domain
CDDcd100177.24E-12798885No hitNo description
PROSITE profilePS5086312.252799887IPR003340B3 DNA binding domain
SMARTSM010193.1E-13800887IPR003340B3 DNA binding domain
PfamPF023625.5E-11803884IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.6E-219351028IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.1E-209361029IPR015300DNA-binding pseudobarrel domain
CDDcd100179.49E-179371029No hitNo description
SMARTSM010196.6E-209381032IPR003340B3 DNA binding domain
PROSITE profilePS5086312.8879381031IPR003340B3 DNA binding domain
PfamPF023624.9E-179421028IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009507Cellular Componentchloroplast
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1144 aa     Download sequence    Send to blast
MITIRDEQMS WAFSLYPCRE STYIGGGWHN FFLENCLKQG DCVAFEIVVT GKKPILKTGQ  60
RIQTSNMTSP KAQVPASTSA NANPHFISTI KPYSFSQDCL KIPVGFLKHL KGQEHEHAIL  120
RRNGKKWQVK LNGPRFEEGW EKFAEEHDLQ MGSVLEFRHE GDMEFEVSIL DSSQCDKEYV  180
DHLQEEEEET AKKSDLEGKL KIMSSDKALP NVEAAKDMPL DPAHFTCTMK SYYLSNSCLR  240
VPTPFVRENG LCNRKCKIMI RDEQRSWIFS LNSCGKNTKI GGGWRNFCLA NCLKEGDRLM  300
FEIVANGEIP MFKFHERPKP NIKSSDAAFP NVEAAIDMPL LHPHFICTMK PYYLANYFLC  360
VPRPFARLHS LGNKECAITI NDNQRSWTFS LHSSSGHTYI GGKWHDFCAA NCLRGGDYVM  420
FEMVANGEKP TLKFHGKILC PALSVLKYLK GQEHEHAILR RNGKEWKVKL NGHRFDGGWA  480
KFAEEHDLQL GNVLVFRHER DMEFEVTIFD SSQCNGEYVE HIQEEGEETA KKSDLEENSK  540
IISSDKAFPN VEAAKDLHFG QAHFTCTMKS SYLSNSFLPI PKPFARENRL SDRNCTITIR  600
DEQRSWTFSL YSSGKNTYIG GGWRNFCLAN CLEEGDCLMF EIVANEENPM MKFHAYMNCL  660
CETDHKLLQR VPLPFARLHG LRNKTCAITI KDKQSSWTFS LYTSSGHTYI GGGWSDFCAA  720
NCLSEGDYIM FEMVANGEKP TLKFHDLKVH ASLQPEGKKT SLDAESVFTQ GLRIETSEMT  780
AVKEQAPAST SANAIANPHF ISTIQHYSIN KAYFKIPIGF LKHLKEHGDE HAILRRGVNK  840
WLVKVNGRRL EEGWQNFAEE NGLQLGDFLV FKHEGDMEFE VFIFDSSQCE RVNGWSQQVV  900
HEREEAKEKP KSNIKTSSGK AFPKVESAYK DMHLTHPHFI CTIRPYCLSK HFLSIPKQFA  960
RENRLNNRRC TITMTDEQMS WTFSLYTNGP NTYFGRGWHE FCVANCLKEG DRLMFEIVSN  1020
GETPVFRFYG NYDIVVSIGK IDLRGSPSLQ LELKKNNLDN YKRIRDKGLH FQEEKTDLRK  1080
TSNVTAPILQ VPASTSADDA NPYFISTIKS YTMKNPVLVF KFRFIIEAMF CFEKKKNCRI  1140
ISVK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019254330.11e-149PREDICTED: B3 domain-containing protein REM10-like isoform X3
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32215171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.12e-42B3 family protein