PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00152g14024.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 396aa    MW: 43450.5 Da    PI: 7.4975
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00152g14024.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.3e-11324369655
                               HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +++Er RR ri +++ +L++l P+     +k  + a++L +Av+YIk+Lq
  Peinf101Scf00152g14024.1 324 SIAERVRRTRISERMKKLQDLFPNM----DKQANTADMLDLAVDYIKDLQ 369
                               689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.43318368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-15321385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.29E-12322373No hitNo description
Gene3DG3DSA:4.10.280.103.9E-15323385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-8324369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-12324374IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MFSSTEPIIS REMDKLNSFL FSPSGSFKNC EQAIHNEAKE IMGSDYFNQN SQFQQSNNGG  60
LARYRSAPSS FFAGILDGDA NNSGENYVTH DGSSSSDSDT MFTALLNGNN NSNSSNLNDQ  120
ISIQKNQLQF GSSMKQETAE NGFESCMNYG VGVQMQSSRS VGLNSNNGNG GGSNLIRQSS  180
SPAGFFNGFD VMGEVGNYRT GANREASSSA NGFNNHISYS SAQSSSSNLM PSIAENESWN  240
DSSFNSLKRN RDGDLKVFSN NFNAMTTQNG ESRNYTSGSG LTHHLSLPKT SSEMAAIEKY  300
LQFQQDSVPC KIRAKRGFAT HPRSIAERVR RTRISERMKK LQDLFPNMDK QANTADMLDL  360
AVDYIKDLQK QVQTLNDKKA KCSCPSKQLQ YSNGTT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004229606.11e-177transcription factor bHLH130
TrEMBLM1CDA40.0M1CDA4_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000650290.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44352238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-64bHLH family protein