PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00159g03007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 212aa    MW: 24088.7 Da    PI: 4.2567
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00159g03007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.88.1e-111546132
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                              +g+WT+eEd++l+++++ +G+g+W++ ++  g
  Peinf101Scf00159g03007.1 15 KGPWTPEEDLKLIQYIEVHGPGNWRSLPKNAG 46
                              79************************999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-12745IPR009057Homeodomain-like
PROSITE profilePS5129412.7361055IPR017930Myb domain
SuperFamilySSF466894.67E-91146IPR009057Homeodomain-like
PfamPF002494.1E-91546IPR001005SANT/Myb domain
CDDcd001673.17E-71746No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MGRSPITSDK SGLKKGPWTP EEDLKLIQYI EVHGPGNWRS LPKNAGLQAL VNPQFLRLAT  60
TLLTSHTENN PEMLLQRLQA NQLLNTQIQK HEEPEMLLRE LQQNQFLENQ FQSQITENPT  120
CTPSNLVPYF VNGQNLQENV MQPLQTNGGC TSDVQSENSN FESLNNTSNQ NFSFDSVFST  180
PLSSTEDERD SYCSNFMKFE IPESLCNFDD LL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009764351.14e-51PREDICTED: transcription factor MYB39-like
RefseqXP_016458866.14e-51PREDICTED: transcription factor MYB39-like
TrEMBLA0A1S3Z3541e-49A0A1S3Z354_TOBAC; transcription factor MYB39-like
TrEMBLA0A1U7VHH01e-49A0A1U7VHH0_NICSY; transcription factor MYB39-like
STRINGXP_009764351.12e-50(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05100.12e-21myb domain protein 74