PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00169g01011.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 300aa MW: 32326.7 Da PI: 10.0334

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00169g01011.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.7	5.1e-38	36	92	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +kcprCds+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rk k++ Peinf101Scf00169g01011.1 36 PQKCPRCDSNNTKFCYYNNYSLTQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRT 92 689**************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	28.863	37	91	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.7E-32	37	91	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-24	38	91	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	39	75	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MEQAGRSGES DRNQQKRMKM PENIAAAVAT PPQPPPQKCP RCDSNNTKFC YYNNYSLTQP 60 RYFCKTCRRY WTQGGTLRNV PVGGGCRKGK RTIKGGSSSS SSAGESSSRS SQSHPPPPPL 120 NIGTNLSAPF FLGNNSRSQT LPLMSTFYPS GGFLSSLAAM QSMTQSQGVN QSLGVSGNQF 180 GGTSNMTLLQ GLQNLPTPPK ADHQNQQIEP QSGLYQMINR EKSMESSFYQ SDQTLFQPTR 240 PLGSWTQRFI NTSSNNNNND VWNSSASASA SGATTNTATT AGSSLAPNQW PDLPGFGPSP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009623142.1	1e-106	PREDICTED: dof zinc finger protein DOF3.1-like
TrEMBL	A0A1S3YDD1	1e-104	A0A1S3YDD1_TOBAC; dof zinc finger protein DOF3.1-like
STRING	XP_009623142.1	1e-105	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-33	TARGET OF MONOPTEROS 6