PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00169g20009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 188aa    MW: 20929.9 Da    PI: 8.0239
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00169g20009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.1e-111967555
                              HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                       HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                               + +E++RR++++  + +L +l+P      s+  +s  + Le+A++YIk+Lq
  Peinf101Scf00169g20009.1 19 RKTIEKNRRNQMKALYLKLNSLVPRH---ASREvVSLPDQLEEATNYIKKLQ 67
                              6789*********************6...55666*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.0391466IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-101686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.2E-121992IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.7E-42072IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-72067IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.24E-62271No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MELQQCNNPS SSSLSKADRK TIEKNRRNQM KALYLKLNSL VPRHASREVV SLPDQLEEAT  60
NYIKKLQIDL EGMTQRKDRL TGDHDQISCS RSSCGRLKEG LLLPHIEIHN VDSALEVVLI  120
TGLDHQLMFN HIIRILHEEG VEVINASYSV IGDTILHSIH SMVGECTSGY GAARISGRLK  180
KFLGTGAS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009619775.11e-85PREDICTED: transcription factor bHLH55-like
RefseqXP_016435311.11e-85PREDICTED: transcription factor bHLH55-like
TrEMBLA0A1S3X6393e-84A0A1S3X639_TOBAC; transcription factor bHLH55-like
STRINGXP_009619775.14e-85(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51052131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-40bHLH family protein