PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00169g22008.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 152aa    MW: 17714.4 Da    PI: 9.9219
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00169g22008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.7e-101965555
                              HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                               + +E++RR++i+  + +L +l+P++    ++ +s    Le+A +YIk+Lq
  Peinf101Scf00169g22008.1 19 RKTIEKNRRNQIKALYLKLNSLVPHD----QQMVSLPNQLEEAANYIKKLQ 65
                              678**********************9....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.361464IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-91685IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-101981IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00322070IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-62065IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.09E-42269No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MELQQCNNRA SSSLSKADRK TIEKNRRNQI KALYLKLNSL VPHDQQMVSL PNQLEEAANY  60
IKKLQIHLER MRLRKEGLTR GHDQISSGRS SNRRIKEGLS LPHIEIHHRG DTALDLVLIT  120
DLDYQFMFNR IIRMLYEEGI EVINASYTAI LF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009619775.15e-57PREDICTED: transcription factor bHLH55-like
RefseqXP_016435311.15e-57PREDICTED: transcription factor bHLH55-like
TrEMBLA0A1S3X6391e-55A0A1S3X639_TOBAC; transcription factor bHLH55-like
STRINGXP_009619775.12e-56(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51052131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-28bHLH family protein