PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00175g07005.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

ERF

Protein Properties

Length: 296aa MW: 32838 Da PI: 8.4524

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00175g07005.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.6	2e-20	33	83	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++ GVr+++ +grWvAeI+d s +r r +lg+++t+eeAa+a+++a+++l+ge Peinf101Scf00175g07005.1 33 KFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 83 799****.7*****43...36************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.730.10	7.2E-29	33	91	IPR001471	AP2/ERF domain
SMART	SM00380	8.0E-35	33	96	IPR001471	AP2/ERF domain
Pfam	PF00847	2.5E-15	33	83	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	20.508	33	90	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	2.68E-20	33	91	IPR016177	DNA-binding domain
CDD	cd00018	7.78E-33	33	92	No hit	No description
PRINTS	PR00367	2.9E-7	34	45	IPR001471	AP2/ERF domain
PRINTS	PR00367	2.9E-7	56	72	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence Send to blast
MANSETTIST NTNTTTTTKS PQQQPNKSIL TRKFVGVRQR PSGRWVAEIK DSSQRVRLWL 60 GTYDTPEEAA RAYDEAARAL RGENARTNFA SSITTNPNSD DESINNMLQS NGAISDHSKH 120 GLSFSSIKAK LSKNIQSIMA RNSENKSSSK SRVSDHFTFA RIFHFKNNYQ YQQNHHHVDM 180 KKIEQVVQPS IRVPHVTSDN NNYSNIDPYS SWENSSVSDC SSEWSAFRQL GLDSDNGSLS 240 DASEFFLGDP MMGWVSSPDI MSGGSSSEGS RSKRFKVSSS VMVPPTFTES PLGGEN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5wx9_A	2e-14	33	89	14	71	Ethylene-responsive transcription factor ERF096
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019229180.1	1e-131	PREDICTED: ethylene-responsive transcription factor ERF010-like
TrEMBL	A0A2G2W3T7	1e-132	A0A2G2W3T7_CAPBA; Ethylene-responsive transcription factor CRF1
STRING	XP_009598443.1	1e-128	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12564	17	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G19790.1	1e-17	related to AP2 11