PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00175g10003.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

TCP

Protein Properties

Length: 310aa MW: 33764.8 Da PI: 10.7813

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00175g10003.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.7	1.2e-35	75	165	6	91
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg 88 +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLlq a+p+i+ +tg+++++a ++ + ++ ++ ++ + Peinf101Scf00175g10003.1 75 ASSKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKTDGETIRWLLQHAEPSIISATGSGTTPAIAVsvNGTMKIPTTTEN--N 157 689*********************************************************9999954432111111111111..1 PP TCP 89 .....kaa 91 k++ Peinf101Scf00175g10003.1 158 dvrkrKRC 165 12222111 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	1.1E-30	76	174	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	26.32	77	131	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence Send to blast
MAVPPSARRQ HMVPPTTTIP IISPKQEPQD LADQKPPAPP FIKVTLPTPT MRHSVSPVQL 60 PLSPPPPVQQ HNKVASSKDR HTKVEGRGRR IRMPATCAAR VFQLTRELGH KTDGETIRWL 120 LQHAEPSIIS ATGSGTTPAI AVSVNGTMKI PTTTENNDVR KRKRCSNSEF IDVKQSNNHC 180 ATTINKERVG VDVKHNNVTT SFAPVMSIIP SHYRTIMPVS SMLARNYYSM MAAPSTVWII 240 PQITVPLIPS SRTTSAAHHQ ELTMQPSSCV IVRPATLLDI SSVVIPVLSA SASNANVTTT 300 TTSSSYSFSH

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009601442.1	1e-109	PREDICTED: transcription factor TCP9-like
Refseq	XP_016502708.1	1e-109	PREDICTED: transcription factor TCP9-like
TrEMBL	A0A1S4CN85	1e-107	A0A1S4CN85_TOBAC; transcription factor TCP9-like
STRING	XP_009601442.1	1e-108	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA248	24	201

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-52	TCP family protein