PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00175g20004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 335aa    MW: 38350.7 Da    PI: 6.3262
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00175g20004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.62.4e-101811538127
                       NAM  38 diyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknra..........tksgyWkatgkdkevlskkgelvglkktLvfykg 111
                               +iy    Pw++   ++++++  yfF++ +kk++++k+k+++            +g+ k + +  +++s k+ ++g k+++v+ + 
  Peinf101Scf00175g20004.1  18 EIYGeQPPWQIF-GASHQHQVRYFFTPLKKKKKKKKKKKKKkkhhkrfirtCGNGTLKGQTSGDPIKS-KEIVIGFKRIFVYENT 100
                               555414689996.445566677****98888886665555435666666656699999999999**99.9999*********977 PP

                       NAM 112 rapkgektdWvmheyr 127
                               ++p  ++  W+m+ey 
  Peinf101Scf00175g20004.1 101 QEPM-QHKGWLMKEYF 115
                               7777.7899******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.7711140IPR003441NAC domain
PfamPF023652.8E-623114IPR003441NAC domain
SuperFamilySSF1019414.71E-1424139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MRKKCEPISS KCPIQPGEIY GEQPPWQIFG ASHQHQVRYF FTPLKKKKKK KKKKKKKKKH  60
HKRFIRTCGN GTLKGQTSGD PIKSKEIVIG FKRIFVYENT QEPMQHKGWL MKEYFVGDDF  120
FGENNISKQD DFVICRIKKN TKEKHVEDEA LRGSDHNGFI INKVPEQASE EVQHSESMVT  180
EDTNTTSTTF ELEAYGQQAF TTGIEQGCGV DHHQYTSTSN KFSEVMNGVQ DIFPNSYDQP  240
WTGTEQAGHG ADHQTTNEFS ETISGLEDRF LDKYGQPLFG IEQADNNIDF WKEMANGLTD  300
INVPEEWVTE VQGWIAADQA NETVELQTQQ MGGEH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14362LKKKKKKKKKKKKKKKHHKR
24458KKKKKKKKKKKKKKK
34558KKKKKKKKKKKKKK
44958KKKKKKKKKK
55058KKKKKKKKK
65258KKKKKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_009600309.13e-41(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.11e-07NAC domain containing protein 2