PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00184g03032.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 256aa    MW: 28768.9 Da    PI: 7.9161
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00184g03032.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.81.9e-1354100354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++h+e+ErrRR+riN  +++Lr+llP+       K +Ka+ L +Av+++++L
  Peinf101Scf00184g03032.1  54 KSHSEAERRRRKRINGHLATLRTLLPNT-----IKTDKASLLAEAVRCVREL 100
                               69*************************8.....6**************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.36451100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-1354103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.08E-1154102No hitNo description
PfamPF000109.3E-1154100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-1355109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-1157106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00508154202No hitNo description
SuperFamilySSF550213.48E-5159232No hitNo description
Gene3DG3DSA:3.30.70.2608.0E-6159227No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MHPFSSFYDL AGSCSESYNF LHGIINTSAE MYNVESSCVS PRAMAEAKAI AANKSHSEAE  60
RRRRKRINGH LATLRTLLPN TIKTDKASLL AEAVRCVREL KKTTSELGTL SEDEDTDDFN  120
YMGHNDHTAM KKFMFPSESD ELKLSYCDND TGNTLIKASI CCEDRPEIMM ELRRALSTIQ  180
GKVVRAEMAT VGGRLKCILW VQMLVCSLEN GCRDEGLGQL RRALKVVMDK SNLLQPHQNM  240
GQDLLGNKRP RLYHCS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754436e-47HG975443.1 Solanum pennellii chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016469430.11e-149PREDICTED: transcription factor bHLH30-like
TrEMBLA0A1S3ZYB91e-148A0A1S3ZYB9_TOBAC; transcription factor bHLH30-like
STRINGXP_009605433.11e-148(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-35bHLH family protein