PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00192g00019.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 543aa    MW: 61394.3 Da    PI: 5.6646
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00192g00019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.28.1e-24129190159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               +dDg+ WrKYGqK++ +s++pr+YYrCt +   gC ++k+v+r +  p  + ++Y+g+H+++
  Peinf101Scf00192g00019.1 129 VDDGHVWRKYGQKQILDSPYPRNYYRCTNKfdqGCAATKQVQRIQAKPPRFRTMYQGHHTCR 190
                               59**************************99999***************************96 PP
2WRKY75.28.1e-24344405159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               +dDg+ WrKYGqK++ +s++pr+YYrCt +   gC ++k+v+r +  p  + ++Y+g+H+++
  Peinf101Scf00192g00019.1 344 VDDGHVWRKYGQKQILDSPYPRNYYRCTNKfdqGCAATKQVQRIQAKPPRFRTMYQGHHTCR 405
                               59**************************99999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-24119190IPR003657WRKY domain
PROSITE profilePS5081121.459124187IPR003657WRKY domain
SuperFamilySSF1182902.62E-23125191IPR003657WRKY domain
SMARTSM007748.4E-34129191IPR003657WRKY domain
PfamPF031066.2E-23130190IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.4E-25335405IPR003657WRKY domain
PROSITE profilePS5081121.459339402IPR003657WRKY domain
SuperFamilySSF1182902.62E-23340406IPR003657WRKY domain
SMARTSM007748.4E-34344406IPR003657WRKY domain
PfamPF031066.2E-23345405IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MESSSWPENP LAHLKILIKE LHCGQEFTNR LREVIKKPQG NGCTNTMFAE DLVEKIMGSF  60
CKTLSILNSN KFNEDSQVPV AISPRRKGGR TSPEDSTGSC KASSVKDGRG CNKKRKIPET  120
STKETSTLVD DGHVWRKYGQ KQILDSPYPR NYYRCTNKFD QGCAATKQVQ RIQAKPPRFR  180
TMYQGHHTCR TYPTVSQILL DSSTDEDSSV LLSFDSNVNY NHPYFPTFPS IKKETTEEFS  240
LSGIYSCNNQ NQSSSTNYFI TSNDYLTPTA ETPNDIKATL SSGSDNVDFI SSGSVYDSCC  300
STITSSMEME MDMLVMRSID FEDFPFEFEG KIPETSTKET STLVDDGHVW RKYGQKQILD  360
SPYPRNYYRC TNKFDQGCAA TKQVQRIQAK PPRFRTMYQG HHTCRTYPTV SQILLDSSTD  420
DDSSVLLSFD SNVNYYHPYF PTFPSIKKET KEEVSLSGIY SCNNQNQSSS TNYFITSNDY  480
LTPTDETPHG IIKATLSSGS DNVDFISSGS VYDSCCSTIT SSMQMEMDML VMRSIDFEDF  540
PFE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-18129405869OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016448472.11e-151PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A1S3Y8U01e-150A0A1S3Y8U0_TOBAC; probable WRKY transcription factor 70
STRINGXP_009765461.11e-136(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42302143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-32WRKY DNA-binding protein 70