PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00199g19020.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HSF
Protein Properties Length: 509aa    MW: 57158.3 Da    PI: 4.7005
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00199g19020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.71e-34941852102
                               HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXX CS
              HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksF 86 
                               Fl+k++++++d+ l+++isw ++g+sf+v+d+ ef++ +Lp++Fkh+nf+SFvRQLn+YgF+k++ ++         weF+++ F
  Peinf101Scf00199g19020.1  94 FLSKTFDLVDDPLLDSIISWGTKGDSFIVWDSVEFSRFILPRHFKHNNFSSFVRQLNTYGFRKIDADK---------WEFANEGF 169
                               9****************************************************************999.........******** PP

                               XXXXXXXXXXXXXXXX CS
              HSF_DNA-bind  87 kkgkkellekikrkks 102
                                +gk++ll++i+r+ks
  Peinf101Scf00199g19020.1 170 LRGKRHLLKNIQRRKS 185
                               **************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467852.58E-3389183IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.104.5E-3690183IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004154.6E-5590183IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000569.6E-1894117IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004475.7E-3094183IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000569.6E-18132144IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340133157IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000569.6E-18145157IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MSTDLSPVLF SDILSCRRYL YIPFLNPFHR PFSYLPFSTF SLFIPTNTMN PFDNTETEMD  60
PLLNFESLTT PFDDEMSVMP QPMECLHGIQ IPPFLSKTFD LVDDPLLDSI ISWGTKGDSF  120
IVWDSVEFSR FILPRHFKHN NFSSFVRQLN TYGFRKIDAD KWEFANEGFL RGKRHLLKNI  180
QRRKSPQSHH AGSSSGSSAE AGKAAMDEIE KLRKEKSLMM QEVVELQQQQ CGTVQQMEAV  240
NEKLHAAEQR QKQMVSFLAK VFQNPTFLAR VQQMKEQGKI TSPRTMRKFV KHQLHDPGRV  300
ESSMEGQIIK YRPDFQDLAI SCENLDFDPV VGQQLPGTGF GAEAMPFKGG SVASKGLAVA  360
HELLESPDRA IEGALYFNSE DSHFKGKNVA SPQLDVMPEC FVSFPEELAN EKNISEFPSP  420
GIECMVKEEG VWSMGFEASA GMSSTGTELW GSLGNYDVSD FGVSSGLSDV WDIDPLQAAG  480
SSGVDQWPDD ESPFDQPESH ASQPKNDSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A3e-249118317120Heat shock factor protein 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016473897.10.0PREDICTED: heat stress transcription factor A-3-like
TrEMBLA0A1S4AB660.0A0A1S4AB66_TOBAC; heat stress transcription factor A-3-like
STRINGXP_009621033.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87272025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.11e-87heat shock transcription factor A3