PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00221g06003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 214aa    MW: 23883.3 Da    PI: 6.9631
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00221g06003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.4e-1592142255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y GV +++ +g + AeIrdp   + k ++ +lg++ t+e+Aa a+++a+ +++g
  Peinf101Scf00221g06003.1  92 RYIGVKRRH-WGTFSAEIRDP---NrKGAKLWLGTYETPEDAALAYDQAAFNIRG 142
                               699**9888.**********9...6566************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.93E-2592152No hitNo description
PfamPF008472.0E-1092142IPR001471AP2/ERF domain
SMARTSM003802.7E-2992156IPR001471AP2/ERF domain
SuperFamilySSF541716.34E-2092151IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.5E-2992151IPR001471AP2/ERF domain
PROSITE profilePS5103221.36492150IPR001471AP2/ERF domain
PRINTSPR003677.7E-1093104IPR001471AP2/ERF domain
PRINTSPR003677.7E-10132152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MNLADETSSS FDELGYLFES IEQDVLNDSY FLEGLCNNAL PNNNSPISKF ASTPNSDENF  60
EEQNHINPEP AEERKDSNAA VLEANTPQDW RRYIGVKRRH WGTFSAEIRD PNRKGAKLWL  120
GTYETPEDAA LAYDQAAFNI RGSKARLNFP HLIGSNMPKP ARVTSTSSRA RSSKSASSSS  180
STSTENGTRK RKIDVINSIA NSKLIRHSLI NLQM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-2391150160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019241433.11e-72PREDICTED: ethylene-responsive transcription factor 2-like
TrEMBLA0A1J6JNR92e-71A0A1J6JNR9_NICAT; Ethylene-responsive transcription factor 13
STRINGXP_009625878.11e-67(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-35ethylene-responsive element binding factor 13