PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00235g07011.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 190aa MW: 21153.9 Da PI: 9.5962

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00235g07011.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31.1	7.7e-10	40	118	5	91
FAR1 5 eYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 ++Ak+ GFs++k++ kk+ ++ + it r+++C k gk+++ +++ +++ a + ++ + + wev+++ eHnH Peinf101Scf00235g07011.1 40 DHAKKHGFSITKRSCKKQsSEYDLITARRLYCHKAGKPARYQTS----------KKVYWMAGIYATLCSdRTSWEVQSVTVEHNH 114 589******99998875777889********9987655..........889999999999999899*********** PP FAR1 88 elap 91 +l p Peinf101Scf00235g07011.1 115 DLEP 118 *975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.0E-6	40	118	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence Send to blast
MAGENNDPNV ATGEGPGINL RAPAGGPNVG MKFPSLEAMD HAKKHGFSIT KRSCKKQSSE 60 YDLITARRLY CHKAGKPARY QTSKKVYWMA GIYATLCSDR TSWEVQSVTV EHNHDLEPRL 120 SWLMAAHRKV TPALKRDLVA ADTAGVRPCR SQWVPVYLTD XEPVGAGIPE RHVLGWYEIH 180 TAERVNARIL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7498	2	16