PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00239g07015.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 308aa    MW: 34937.4 Da    PI: 6.6882
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00239g07015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.54.4e-1363143190
                      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 
                               +fY+++Ak  GF +++++skk k +g     +++C   gkr++ +++          ++++C a+++ ++     +w+v++++ +
  Peinf101Scf00239g07015.1  63 SFYKAHAKLKGFCIVRRSSKKYKISGVRNYVHYCCDITGKRDNATTT----------KKIQCPAEVNANLAAdGITWVVNSVNIN 137
                               5***************************************9997766..........9*************96779********* PP

                      FAR1  85 HnHela 90 
                               HnH+l 
  Peinf101Scf00239g07015.1 138 HNHDLE 143
                               ****96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.7E-963143IPR004330FAR1 DNA binding domain
PfamPF105516.1E-9265305IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MKVMGEGGGE EVDGTSVNGD EAEEVEGFDV EVEGGDGDIE YRYNVRLGPQ SGMTFDSLEE  60
FHSFYKAHAK LKGFCIVRRS SKKYKISGVR NYVHYCCDIT GKRDNATTTK KIQCPAEVNA  120
NLAADGITWV VNSVNINHNH DLEQDLSRLM PGHRHMSKSL KRSLIANDRA GVRPSKSIRA  180
LQSQLDGPEN LGCSQEYCRN FINNSRKLNL EPGDTAFIRQ FFCDMQTKDI DFFHLMDIND  240
EGRLRNLIWV HPQRKAAYQK FHDLTCVDTT YLVNRYDMPF CCFISINHHC QSILLGCALV  300
SKEDIPTH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019230525.11e-92PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A1J6KKE09e-87A0A1J6KKE0_NICAT; Protein far1-related sequence 5
STRINGXP_009797803.12e-86(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1301943
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-33FAR1 family protein