PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00244g06031.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 228aa    MW: 25887.4 Da    PI: 9.0187
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00244g06031.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.21.8e-082463340
                              SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
           Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40
                               WT+eE +++  a + +  +   +W++I+++++ g++  ++
  Peinf101Scf00244g06031.1 24 EWTKEENKRFESALAIYDEKtpnRWSKISAMIP-GKSVLDV 63
                              7********************************.*998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.9461771IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.609.4E-51767IPR009057Homeodomain-like
SMARTSM007171.3E-102173IPR001005SANT/Myb domain
SuperFamilySSF466891.2E-112377IPR009057Homeodomain-like
CDDcd001672.52E-82471No hitNo description
PfamPF002495.9E-72467IPR001005SANT/Myb domain
PROSITE profilePS512949.831102152IPR017930Myb domain
SMARTSM007171.7106150IPR001005SANT/Myb domain
SuperFamilySSF466892.09E-9109151IPR009057Homeodomain-like
CDDcd001671.13E-4110147No hitNo description
TIGRFAMsTIGR015571.4E-11110151IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.609.7E-6110147IPR009057Homeodomain-like
PfamPF002491.4E-5111147IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
METLFPTTFL PNSSWMMQES KSTEWTKEEN KRFESALAIY DEKTPNRWSK ISAMIPGKSV  60
LDVMMQYKEL VADVSDIEAG LDPIPRHFAS SFTLDFVDDR QINSLRKRSR RFLMGLEKYG  120
KGDWRNISKN FVISKTPTQV ASHAQKYYLR QLSGGKDKKR PSIHDITTVD LTDNALLSNN  180
KSMREEKSCT ASHLQISTST ADVLIGCWNN SNDGGLMAFH SLYGSSIL
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019241356.11e-124PREDICTED: transcription factor DIVARICATA-like isoform X1
RefseqXP_019241357.11e-125PREDICTED: transcription factor DIVARICATA-like isoform X2
SwissprotQ8S9H74e-68DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A1J6JSM61e-123A0A1J6JSM6_NICAT; Transcription factor myb1r1
STRINGXP_009776702.11e-123(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.13e-73MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]