PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00244g19034.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 229aa    MW: 26252.5 Da    PI: 4.5701
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00244g19034.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.11e-083969131
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                              rg+WT eEd  l++ ++ +G g+W++ ar+ 
  Peinf101Scf00244g19034.1 39 RGPWTVEEDFTLINFIAHHGEGRWNSLARCA 69
                              89**************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.1433472IPR017877Myb-like domain
SuperFamilySSF466891.48E-73672IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-93772IPR009057Homeodomain-like
PfamPF002491.1E-63968IPR001005SANT/Myb domain
CDDcd001672.01E-54172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MDHHHKTKVG LGRRGEDYRT SNVMNQENIR EEDIMDLRRG PWTVEEDFTL INFIAHHGEG  60
RWNSLARCAV ERIQAAATMA ATSSTTTNTY IQNQENQQSV PNMSHMSQFL PIQLENHEKT  120
NNINHSSMTL TFENSSTTTS SDNSIGRQVS PTSDLSDYCY NFPINQSSNN QDYTPFNQNY  180
GDSLISATGY IPQAMDQQNS HWVDGEYVSD NSWNIEDMWF LQQQLNNNL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009621085.17e-44PREDICTED: transcription factor MYB108-like
RefseqXP_016479574.17e-44PREDICTED: transcription factor MYB108-like
TrEMBLA0A1S4ASB22e-42A0A1S4ASB2_TOBAC; transcription factor MYB108-like
STRINGXP_009621085.13e-43(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.28e-18myb domain protein 78