PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00251g08012.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 110aa MW: 12818 Da PI: 10.447

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00251g08012.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	43.9	7.9e-14	11	66	1	48
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk........t 48 +fY +YA++ GFsvr+ +ks++++ i+++ fvCskeg+r+++ k + Peinf101Scf00251g08012.1 11 NFYLDYAHRNGFSVRRGCVTKSRKDKLIISQVFVCSKEGFRSKNILKtidhkmspE 66 6*****************************************99887665554431 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.2E-11	11	67	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence Send to blast
MEFSSLDDSF NFYLDYAHRN GFSVRRGCVT KSRKDKLIIS QVFVCSKEGF RSKNILKTID 60 HKMSPEKDAK KKKEHELFVG LYLATITNLL LQVVKTSCVQ KEKSQRLKRI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025884696.1	2e-20	protein FAR1-RELATED SEQUENCE 11-like
Refseq	XP_025884722.1	3e-20	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2G3AKS2	1e-32	A0A2G3AKS2_CAPAN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA645	8	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	2e-10	FAR1-related sequence 12