PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00255g11050.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ZF-HD
Protein Properties Length: 94aa    MW: 10303.7 Da    PI: 9.5449
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00255g11050.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer643e-202274558
               ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                               Y eC++N+ a+  ++a+DGC  f p  g  g++ a++C  CgCHRnFHRr  +
  Peinf101Scf00255g11050.1 22 LYGECMRNQLADSMTYATDGCHGFGPG-GPPGSIGAMRCQTCGCHRNFHRRLDT 74
                              7*************************8.888*******************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257743.0E-51774IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047701.5E-182271IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152317.7012372IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.6E-152371IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
MANNNMFRAN KPWANGSITP ALYGECMRNQ LADSMTYATD GCHGFGPGGP PGSIGAMRCQ  60
TCGCHRNFHR RLDTGNHQLP PPSHPRRQKK CGTF
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015164998.18e-18PREDICTED: zinc-finger homeodomain protein 7-like
SwissprotQ2QW443e-12ZHD3_ORYSJ; Zinc-finger homeodomain protein 3
TrEMBLA0A314L9L85e-27A0A314L9L8_NICAT; Uncharacterized protein
STRINGPGSC0003DMT4000956423e-17(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1533648
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.16e-09mini zinc finger 1