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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Peinf101Scf00255g11051.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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| Family | ZF-HD | ||||||||
| Protein Properties | Length: 273aa MW: 30916.3 Da PI: 10.5724 | ||||||||
| Description | ZF-HD family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | ZF-HD_dimer | 55.7 | 1.1e-17 | 20 | 72 | 5 | 58 |
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
Y eC++N ++a+DGC+ f p gt++al+C CgC nFHRr ++
Peinf101Scf00255g11051.1 20 LYGECMRNRSTGSMTYATDGCQGFAPG-YPPGTIEALRCQTCGCYQNFHRRLET 72
6*************************8.5559******************9765 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF04770 | 1.2E-16 | 20 | 70 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
| ProDom | PD125774 | 5.0E-8 | 21 | 69 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
| PROSITE profile | PS51523 | 17.033 | 21 | 70 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 273 aa Download sequence Send to blast |
MLRIRANKTW ANRRSRSLPL YGECMRNRST GSMTYATDGC QGFAPGYPPG TIEALRCQTC 60 GCYQNFHRRL ETRHPQQQVY DGTHIGYSSP STIIPLPPPP PATQPDVAPA VDPAMKELNP 120 NANSSSHSLR EVVQKVKKKW MREQWKKLAS SKSLLPPIPP GPPLRVYHMR RRDIIKARIA 180 AKNNYEGGSS SKRRPCSYDY YLREEMNERV QMLSKGLEWL NVKNKLKKKN KNRIGTIKKL 240 RHESSSDTNK NESDDESSSG SSLKISNSSL GIM |
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA15336 | 4 | 8 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G74660.1 | 7e-12 | mini zinc finger 1 | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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