PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00264g03003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 331aa    MW: 38361.3 Da    PI: 5.4819
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00264g03003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.8e-071932321054
                               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               r RR+++ ++   L +llP++     kK++ a++Le+A +Y+k L
  Peinf101Scf00264g03003.1 193 RTRRQKLSEKTRSLEKLLPWD-----KKMDTATMLEEAYKYVKFL 232
                               99******************9.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-10181242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-9181241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.443183232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-4189238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.18E-6193237No hitNo description
PfamPF000102.0E-4193232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MFQPLMDADE AFINGMYDGL SYQSILNMDL NHSYFHPPLL SQMHQTPITF DFSSTTTGDF  60
QNKLKCPKVE PLLYDDFNPY YYDASLSTYS YGGEVMIPDL SLSPPFQTLK FPKLEPVTED  120
FYYYSYPYNN NDIILNEPYN YSNSFTTLPD LRSVEQYPYN YTDFFNGESS LYSTETLVKP  180
KRQRKPYEKS TTRTRRQKLS EKTRSLEKLL PWDKKMDTAT MLEEAYKYVK FLKAQVSVLQ  240
NMPTLVEGGG SSYEDKKGKE SCTSSSVCGT LLERLNRQQL LQVVLNSAKA QTYLYSKGCC  300
VYSAEQLVEI QKNDRRNALN QQMLFFTGLF S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178183KPKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006360553.12e-95PREDICTED: transcription factor bHLH69
TrEMBLM1CH105e-94M1CH10_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000672878e-95(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112501821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.11e-17bHLH family protein