PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00264g04002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GeBP
Protein Properties Length: 411aa    MW: 45656.7 Da    PI: 5.2799
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00264g04002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573112.52.6e-35161253398
                    DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 
                               ++rlw++eD+i++L+G+ +fka++g +p +d++af++fvk++++++vsksql++K+rrLKkKf ++vk+   g +p+f k+hd  
  Peinf101Scf00264g04002.1 161 PNRLWNDEDQIAVLKGMAEFKAQKGIEPNSDMSAFHDFVKGKLQVEVSKSQLSDKVRRLKKKFFTHVKN---GGDPVFPKPHDYL 242
                               78******************************************************************9...************* PP

                    DUF573  88 ifelskkiWgs 98 
                               +fe+skkiWgs
  Peinf101Scf00264g04002.1 243 VFEYSKKIWGS 253
                               *********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.6E-30162252IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MAPKSKSRLV EEPPSASSSE EQEQVEESQE EQESEEEQQQ EQEQSEEEQE SDEEEEEEEE  60
PKTAPVEKKP TISKTPQKSQ SPSSESGSGS DSDSDSGQSQ QPSPSASDFT VKPSAPVPTK  120
VPAKRPQEAQ EKSQKDSRRL KKPKIAEEQE DKKVPSSVST PNRLWNDEDQ IAVLKGMAEF  180
KAQKGIEPNS DMSAFHDFVK GKLQVEVSKS QLSDKVRRLK KKFFTHVKNG GDPVFPKPHD  240
YLVFEYSKKI WGSGGKADSN AGTSNGVSEN VVNANGKAKK TAAVEVKKGS ESKKSAKVST  300
KLKDVEKPKE DEKVKDVAVK EVVKEDIVKG GDRQDFQSKY PHLAASFDLP AVYPSASDML  360
KKNMSLIDGD KAKVLEEKWK KLHDAEADLM LKRLDLVREH YKLVVDAMRG N
Functional Description ? help Back to Top
Source Description
UniProtMay act as a transcriptional regulator. Binds specifically to the B-box motif, a promoter element that is required for the tuber-specific and sucrose inducible expression of the patatin gene. {ECO:0000269|PubMed:12028578}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009777843.11e-140PREDICTED: mediator-associated protein 1-like
RefseqXP_016481909.11e-140PREDICTED: mediator-associated protein 1-like
SwissprotQ94IK21e-124STK_SOLTU; STOREKEEPER protein
TrEMBLA0A1S4AZB41e-139A0A1S4AZB4_TOBAC; mediator-associated protein 1-like
TrEMBLA0A1U7WGR31e-139A0A1U7WGR3_NICSY; mediator-associated protein 1-like
STRINGXP_009777843.11e-140(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23692041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-25DNA-binding storekeeper protein-related transcriptional regulator