PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00267g09015.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bZIP

Protein Properties

Length: 491aa MW: 54814.2 Da PI: 7.0689

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00267g09015.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.9	4.5e-08	213	234	4	25
XCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKk 25 k rr+++NReAAr+sR+RKk Peinf101Scf00267g09015.1 213 AKTLRRLAQNREAARKSRLRKK 234 6889*****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.8E-5	208	234	No hit	No description
PROSITE pattern	PS00036	0	217	232	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	7.8E-32	269	344	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence Send to blast
MESQRIGDTA SLSADHSGPS HHHHHNMSYA LLRGLNPTNT TSFMYHSTPN NQEPPAFDFG 60 ELEEAIVLQG VKMSNDETKA SLYAATNRPA ATLEMFPSWP TRFHHTPRGS SKSGEESTDS 120 GSALNTFSSR GEHHLEPESP ISRKQSSDHH QTIEQNQQLQ IPQLQLPQQH QQLQEMASDS 180 PRTRVSNSTE PTSKPNYEKR KGAGSTSDRV TDAKTLRRLA QNREAARKSR LRKKGLFMGG 240 GAAANSNISS GAAIFDMEYS RWLDDDQRHI AELRTALQAH LGDADLRVIV DGYIAHYDEI 300 FRLKGVAAKS DVFHLITGIW TTPAERCFLW MGGFRPSELI KMLIAQLDPL TQQQVVGIYS 360 LQQSSQQAEE ALSQGLEQLQ QSLVETVASA SVNDGMHHMA VALGKLANLE GFVRQADNLR 420 QQTLHQLHRI LTVRQAARCF LVTGEYYGRL RALSSLWASR PRETMIVDDN SCQTTTELQM 480 IQASQHHFSN M

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence Send to blast

MESQRIGDTA SLSADHSGPS HHHHHNMSYA LLRGLNPTNT TSFMYHSTPN NQEPPAFDFG  60
ELEEAIVLQG VKMSNDETKA SLYAATNRPA ATLEMFPSWP TRFHHTPRGS SKSGEESTDS  120
GSALNTFSSR GEHHLEPESP ISRKQSSDHH QTIEQNQQLQ IPQLQLPQQH QQLQEMASDS  180
PRTRVSNSTE PTSKPNYEKR KGAGSTSDRV TDAKTLRRLA QNREAARKSR LRKKGLFMGG  240
GAAANSNISS GAAIFDMEYS RWLDDDQRHI AELRTALQAH LGDADLRVIV DGYIAHYDEI  300
FRLKGVAAKS DVFHLITGIW TTPAERCFLW MGGFRPSELI KMLIAQLDPL TQQQVVGIYS  360
LQQSSQQAEE ALSQGLEQLQ QSLVETVASA SVNDGMHHMA VALGKLANLE GFVRQADNLR  420
QQTLHQLHRI LTVRQAARCF LVTGEYYGRL RALSSLWASR PRETMIVDDN SCQTTTELQM  480
IQASQHHFSN M

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019267195.1	0.0	PREDICTED: transcription factor TGA2.2-like
Refseq	XP_019267203.1	0.0	PREDICTED: transcription factor TGA2.2-like
Swissprot	Q93XM6	0.0	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A1J6IMX9	0.0	A0A1J6IMX9_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
STRING	XP_009613713.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3683	23	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-154	bZIP family protein

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]