PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00339g05001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 187aa    MW: 21590.1 Da    PI: 4.5282
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00339g05001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.6e-14754148
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                              +g+W++eEd++l  ++ ++   +W+  ++  g+ Rt+k+c++rw +yl
  Peinf101Scf00339g05001.1  7 KGPWSPEEDQKLTSYIMKYRIWNWNQMPKFAGLSRTGKSCRLRWVNYL 54
                              79*****************999************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.008258IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.7E-21457IPR009057Homeodomain-like
SMARTSM007173.0E-11656IPR001005SANT/Myb domain
PfamPF002491.5E-12754IPR001005SANT/Myb domain
SuperFamilySSF466893.73E-20880IPR009057Homeodomain-like
CDDcd001679.38E-9954No hitNo description
Gene3DG3DSA:1.10.10.608.6E-65888IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MGTNSKKGPW SPEEDQKLTS YIMKYRIWNW NQMPKFAGLS RTGKSCRLRW VNYLRPDLKR  60
GPFSMEEVET VIRMYQSLAK KAKELEMRTR GETQEKPNQS LDMSSSDITF DENHNWDFAN  120
FSETSSEGDY CVNSLVNQEA IPIIDSMVIL ESNPTTSEDP DFRDVSVNSS NVDFWLELYM  180
AAENLAG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004240768.18e-60transcription factor MYB30
TrEMBLA0A3Q7GR982e-58A0A3Q7GR98_SOLLC; Uncharacterized protein
STRINGSolyc06g034000.1.13e-59(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-31MYB-like 102