PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00343g03004.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 107aa MW: 12511.3 Da PI: 10.4625

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00343g03004.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.4	1.8e-16	11	92	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fY+ Y+k++GF+ r++++++s ++++i+ r+fvCskeg++ + ++ + ++r+ t +l +k gkw v+ +++eHnH Peinf101Scf00343g03004.1 11 EFYELYGKRMGFTARNNRTRRSLKDNSIIGREFVCSKEGFQFGKLES-NIGLQSRPAT------RLLIKDG--GKWLVYAFVKEHNH 88 6**************************************998887.4444455544......5677766..************ PP FAR1 88 elap 91 el+p Peinf101Scf00343g03004.1 89 ELNP 92 *985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.9E-13	11	92	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 107 aa Download sequence Send to blast
MKFESGEDAR EFYELYGKRM GFTARNNRTR RSLKDNSIIG REFVCSKEGF QFGKLESNIG 60 LQSRPATRLL IKDGGKWLVY AFVKEHNHEL NPSKLPRRRS HIIAFCE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012455905.1	4e-50	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1
Refseq	XP_012455907.1	4e-50	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1
Refseq	XP_012455908.1	4e-50	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1
Refseq	XP_012455909.1	4e-50	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1
Refseq	XP_012455910.1	2e-50	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X2
TrEMBL	A0A2R6S0N5	8e-50	A0A2R6S0N5_ACTCH; Protein FAR1-RELATED SEQUENCE like
STRING	Gorai.011G141900.1	2e-49	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA21641	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	9e-19	FAR1 family protein