PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00347g13003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family TALE
Protein Properties Length: 587aa    MW: 65832.4 Da    PI: 7.5908
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00347g13003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.52.7e-093924242254
                               SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                  Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                               ++yp+ +++  LAk++gL+ +qV++WF N R +
  Peinf101Scf00347g13003.1 392 HPYPTDSDKVMLAKQTGLSRNQVSNWFINARVR 424
                               89*****************************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005743.3E-48192322IPR006563POX domain
PfamPF075262.2E-36197321IPR006563POX domain
PROSITE profilePS5007112.034365428IPR001356Homeobox domain
SMARTSM003892.7E-10368432IPR001356Homeobox domain
CDDcd000861.04E-11368429No hitNo description
SuperFamilySSF466895.56E-17370435IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-27371432IPR009057Homeodomain-like
PfamPF059201.4E-18385424IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010089Biological Processxylem development
GO:0010154Biological Processfruit development
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048457Biological Processfloral whorl morphogenesis
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MAEGFEPYHV PQQSRRDKLR VFAQNHHSTD IENLQLQGCS TTTLLPFYDP SLIPSDFLTS  60
DAKEKGLNFM DPQSSLVSFQ EINSNPFLYN HQNLRFLDHQ PQPLSIVATR DANIININNS  120
KYNNNITQGQ GLSLSLSSSH HHNTNYPSST NSDTVPLELN LQRYDSSMFT TDNVATCNDL  180
SKRSTVPLGP FTGYASILKG SRFLKPAQML LEEICDVGNK GIYTEKFEGD DLVVMDPLQE  240
AHISDAPQYS CSDGNEHRRK KSKLISMLDE VYKRYKLYYQ QLQAVVASFE SVPGLGNAAP  300
FANLSLKALS KHFRCLKNAI TDQLKYTDKS QHCESDSITK VGNPGKGLYS QRAAIHSTGF  360
VDHHQPVWRP QRGLPERAVT VLRAWLFDHF LHPYPTDSDK VMLAKQTGLS RNQVSNWFIN  420
ARVRLWKPMV EEIHMLETRQ AHKAASQREG QNNNNPTSNS LASENPSTSA QQFQDVSLKR  480
TRNHDPSETH LGRDSETRNL SFSSHSRVGV DQMSASAGYA SGVSLTLGLH QNNNNVIGLS  540
ESFPRNAARR FGIDANNEGF MFSSFEAQNR QLGRDIIGGQ LLHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-15374432563Homeobox protein Meis2
3k2a_B2e-15374432563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009610004.10.0PREDICTED: BEL1-like homeodomain protein 9
RefseqXP_018628807.10.0PREDICTED: BEL1-like homeodomain protein 9
TrEMBLA0A1S4ANF40.0A0A1S4ANF4_TOBAC; BEL1-like homeodomain protein 9
STRINGXP_009610001.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35202237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.11e-108TALE family protein