PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00355g03016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 352aa    MW: 38911 Da    PI: 5.8838
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00355g03016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.34.8e-31170228259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +D ++WrKYGqK++kgs++pr+YY+C+++ gC ++k+ver+++dp+++++tY+ eHnh+
  Peinf101Scf00355g03016.1 170 SDMWSWRKYGQKPIKGSPYPRGYYKCSTSkGCLARKQVERNRSDPNMFIVTYTAEHNHP 228
                               79************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-31156230IPR003657WRKY domain
PROSITE profilePS5081135.335164230IPR003657WRKY domain
SuperFamilySSF1182901.57E-26167230IPR003657WRKY domain
SMARTSM007741.0E-36169229IPR003657WRKY domain
PfamPF031067.3E-26171228IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MEEQDWDLHA VVRSCAATNS AAATTTTTPT TSATTSCSIN IQPISNFQPR QDVENNSFCS  60
QDLYFDPRFA QNTSFEELHE LCKPFITESP PQKLPLSPLS VLGGLQKQEQ QQKPLIHQLN  120
STRLIQPKRP LSLNGSTIST TSLHAQSPRT KRRKNQSKKV CQVAADALSS DMWSWRKYGQ  180
KPIKGSPYPR GYYKCSTSKG CLARKQVERN RSDPNMFIVT YTAEHNHPMP THRNSLAGVS  240
RHKTGNSETG TVAAESNKPT SSSPVSSPVT NSPAPENQES SRDERGDIFD EDDDEFGVSN  300
NMALDNMEPD DDFFEGLEEL EVPVTGETLP EKFNGNLQFP WLGNNAATTA AG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-21155231380Disease resistance protein RRS1
5w3x_D2e-21155231380Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016545773.11e-133PREDICTED: WRKY transcription factor 22-like
TrEMBLA0A2G2VST21e-133A0A2G2VST2_CAPBA; WRKY transcription factor 22
STRINGXP_009758175.11e-132(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-61WRKY family protein