PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00359g01030.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 145aa    MW: 16590.2 Da    PI: 4.0029
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00359g01030.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.79.9e-121848131
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                              +g+WT+eEd+ll ++v+++G g+W++++r+ 
  Peinf101Scf00359g01030.1 18 KGPWTPEEDKLLSEYVNLHGEGRWSSVSRCA 48
                              79**************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.6E-131047IPR009057Homeodomain-like
PROSITE profilePS500907.3061346IPR017877Myb-like domain
SuperFamilySSF466894.81E-91650IPR009057Homeodomain-like
SMARTSM007170.00161761IPR001005SANT/Myb domain
PfamPF002497.2E-101847IPR001005SANT/Myb domain
CDDcd001677.02E-82052No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MVGMMGWGAN SDQQEWRKGP WTPEEDKLLS EYVNLHGEGR WSSVSRCAEE VIMQNGDEIN  60
EHDDTLTFTY HPNMENTIVD LPPVRTSSDI SYIWTDNFVM DGLWGGLWNL DVDDHSQPAS  120
DKCKVAIQNQ PTDYQVNLYN GGFIF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754412e-42HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016504544.11e-32PREDICTED: myb-related protein 305-like
TrEMBLA0A1S4CU733e-31A0A1S4CU73_TOBAC; myb-related protein 305-like
STRINGXP_009802593.16e-31(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.12e-15myb domain protein 305