PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00362g09015.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 246aa    MW: 27946.8 Da    PI: 9.5411
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00362g09015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.13.3e-1471153191
                      FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 
                               +fY+++Ak+  Fs++k++ kk+ ++ + it r++ C + gk+++ +++          ++++Cka +  ++ + +  we++++  
  Peinf101Scf00362g09015.1  71 DFYQDHAKKHEFSITKRSCKKQsSEYELITARRLSCRRAGKPARYQST----------KKVDCKAGIYATLCSdRTSWEIQSVTV 145
                               6**************999988846777899***********9987766..........9*************9999********* PP

                      FAR1  84 eHnHelap 91 
                               +HnH+l p
  Peinf101Scf00362g09015.1 146 KHNHDLEP 153
                               *****975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.1E-1071153IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MQSFMDVEES SSNSQVGPDD SLFDNRSNSS MAGENNEPNV VTGESPGIDP RAPARGSTVG  60
MKFPSLEAMV DFYQDHAKKH EFSITKRSCK KQSSEYELIT ARRLSCRRAG KPARYQSTKK  120
VDCKAGIYAT LCSDRTSWEI QSVTVKHNHD LEPRLSWLMA AHRKVTHALK RDFVAADTAG  180
VRPCRSFRTM EIMNGGTENI GCLPRDCRNF INQHRKMRLK HGDAEALKFF FNICILRMKD  240
SFTRWI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7498216
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-14FAR1 family protein