PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00371g03012.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 269aa MW: 30553.6 Da PI: 7.5022

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00371g03012.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.7e-12	94	146	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++h e+Er+RR+++ + ++ Lr+ lP + ++K s ++ +A +YI ++q Peinf101Scf00371g03012.1 94 KKVMHREIERQRRQEMATLYASLRQQLPLEV--IKGKRSTSDHIFEAANYIEHMQ 146 6899***********************64..******************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	7.38E-10	91	150	No hit	No description
SuperFamily	SSF47459	6.28E-13	91	162	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.481	93	145	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.1E-9	94	146	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.9E-9	95	163	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.002	99	151	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence Send to blast
MDNFHSSMFP LQQQDDHNDP NQLLYPPPYA NPSFMYQQGA IQQQDLVIDF ATFQSLELDE 60 NTARFNNNND NNKLPKSSSS ASLQVEKITD DKQKKVMHRE IERQRRQEMA TLYASLRQQL 120 PLEVIKGKRS TSDHIFEAAN YIEHMQKNVK NLEEKRDRIK MKTSNSSNLD FCKSGSSSTI 180 DPSSTIVTVR QCLDGMEILV NCGLKNEGFR LSRVLKVLLQ EGLSIVNCSC TKTKTSVLHT 240 IRAEVGPQAS IDALQQKLAD IINADINFK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009804982.1	1e-112	PREDICTED: transcription factor bHLH118-like
Refseq	XP_009804989.1	1e-112	PREDICTED: transcription factor bHLH118-like
Refseq	XP_016452590.1	1e-112	PREDICTED: transcription factor bHLH118-like
TrEMBL	A0A1S3YKF9	1e-110	A0A1S3YKF9_TOBAC; transcription factor bHLH118-like
TrEMBL	A0A1U7YLP6	1e-110	A0A1U7YLP6_NICSY; transcription factor bHLH118-like
STRING	XP_009804982.1	1e-111	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	8e-33	bHLH family protein