PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00371g03016.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 270aa MW: 30580.9 Da PI: 7.8673

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00371g03016.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40	7.1e-13	80	130	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++h +Er+RR+++ + ++ Lr+llP + +K s ++ +Av+YIk+Lq Peinf101Scf00371g03016.1 80 KKVMHRDIERQRRREMATLYSSLRSLLPLQ----YGKRSVSDHMHEAVNYIKQLQ 130 6899***********************7....5999**************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	3.86E-8	78	134	No hit	No description
PROSITE profile	PS50888	13.738	79	129	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.7E-12	79	145	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.5E-10	80	130	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	3.6E-10	81	144	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0021	85	135	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MFPLQQSDDE LLFQILSNDP CQQGNITQGL IMDYASLETS HSLNIKSTSR KRKLPRKVLG 60 KNLEKKEEIT ASAATTTELK KVMHRDIERQ RRREMATLYS SLRSLLPLQY GKRSVSDHMH 120 EAVNYIKQLQ EDISDLERKR DKLKILIPNS ISPRGSAENG SSDISSVSTD HCVTVSPCHG 180 GVEILITSNN RGESLPLSRV LQELLKEGLD VVSCVSAQVN QKSLHRIQSE ACDMKCINLH 240 ELQRKAFELS FVQMSEQVDM VEFNRMVRDG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009587651.1	1e-115	PREDICTED: transcription factor bHLH36-like
TrEMBL	A0A1S4AYZ3	1e-112	A0A1S4AYZ3_TOBAC; transcription factor bHLH118-like
STRING	XP_009587651.1	1e-114	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	3e-38	bHLH family protein