PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00373g04007.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 233aa MW: 26547.9 Da PI: 7.7243

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00373g04007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.7	2e-31	7	84	53	129
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++ +g ++g++ktLvfyk+rap+g kt W+mhe+rle Peinf101Scf00373g04007.1 7 LNSNEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPrTGVVIGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 84 4678***********************************9867888*************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	40.68	1	102	IPR003441	NAC domain
SuperFamily	SSF101941	1.07E-39	4	102	IPR003441	NAC domain
Pfam	PF02365	2.2E-15	11	83	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence Send to blast
MVKVAKLNSN EWYFFSFRDR KYATGFRTNR ATTSGYWKAT GKDRTVVDPR TGVVIGMRKT 60 LVFYKNRAPN GIKTGWIMHE FRLENPHIPP KEDWVLCRVF HKGKDGNNVG NNLSPENMYE 120 TSVTSAELVV SPLNMENHAT LPKLLPYADG YRPTAAAFFH SPTHHSQNSS NFQLSQEINK 180 VLANEMAQSK YGKEDEFGFL YDMNFEDTGL QDGGVHSCLG DMKFEDENSL VFI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-27	5	102	66	165	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-27	5	102	66	165	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-27	5	102	66	165	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-27	5	102	66	165	NO APICAL MERISTEM PROTEIN
3swm_A	2e-27	5	102	69	168	NAC domain-containing protein 19
3swm_B	2e-27	5	102	69	168	NAC domain-containing protein 19
3swm_C	2e-27	5	102	69	168	NAC domain-containing protein 19
3swm_D	2e-27	5	102	69	168	NAC domain-containing protein 19
3swp_A	2e-27	5	102	69	168	NAC domain-containing protein 19
3swp_B	2e-27	5	102	69	168	NAC domain-containing protein 19
3swp_C	2e-27	5	102	69	168	NAC domain-containing protein 19
3swp_D	2e-27	5	102	69	168	NAC domain-containing protein 19
4dul_A	2e-27	5	102	66	165	NAC domain-containing protein 19
4dul_B	2e-27	5	102	66	165	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009624737.1	1e-135	PREDICTED: NAC domain-containing protein 21/22-like
TrEMBL	A0A1S4BKT8	1e-132	A0A1S4BKT8_TOBAC; NAC domain-containing protein 21/22-like
STRING	XP_009624737.1	1e-135	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1882	24	66

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	3e-63	NAC domain containing protein 74