PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00378g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 306aa    MW: 35063.1 Da    PI: 7.0501
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00378g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.55.3e-1616106186
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                               +W+++ + +L++a  ++  +l+rg+l++++W++v++++     + ++ +r+ +qCk++++ l+k+yk +k+   + + +  s++p
  Peinf101Scf00378g00001.1  16 CWSEEATSTLVDAWGKRYMELNRGNLRQKDWQQVADAVnalhgHTKKTQRTDVQCKNRIDTLKKKYKIEKAKIVESNGNLISSWP 100
                               7****************************************99999*************************99999888899*** PP

                  trihelix  81 yfdqle 86 
                               +f++l+
  Peinf101Scf00378g00001.1 101 FFNRLD 106
                               ****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.1E-2614107No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MNQTPPVRPM PFREDCWSEE ATSTLVDAWG KRYMELNRGN LRQKDWQQVA DAVNALHGHT  60
KKTQRTDVQC KNRIDTLKKK YKIEKAKIVE SNGNLISSWP FFNRLDVLIG NSVKHQYQVA  120
KYTPPVMSLP PPVPMAVPMG VPLPYPRPIA TATATPVILP QKRPLAPSVD DSYFRRNYSA  180
VAAAAAAAAD VDSEEDEEED EEEIEETREE GEGIRMLAKA IEKFGETYER VEVMKQKQMV  240
ELEKKRMQLA KDLEVQRMHM FVQFAKDLEV QNIKQAKRSA SDGKPNYLRH LLASKFETCF  300
LDMYSE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019234266.11e-110PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A1J6L6W01e-109A0A1J6L6W0_NICAT; Trihelix transcription factor asil2
STRINGXP_009757835.11e-110(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-38sequence-specific DNA binding transcription factors