PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00381g00018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 235aa    MW: 25650.4 Da    PI: 4.429
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00381g00018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.42.1e-101442129
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                              +g+WT+eEd +lv +++++G+g+W++++ 
  Peinf101Scf00381g00018.1 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPT 42
                              79************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-12544IPR009057Homeodomain-like
SuperFamilySSF466893.88E-9845IPR009057Homeodomain-like
PROSITE profilePS5129413.181971IPR017930Myb domain
PfamPF002496.4E-91443IPR001005SANT/Myb domain
CDDcd001676.37E-71651No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTDIHTAK QALVDALSLD  60
KKTTNVVSPN INSSTISLPV GQTSSYASSA ENISRLLQNW MKNSPKSSQT TSTSTTSQRS  120
FNNLSMVSSS SPSEVTMSAT TPEGLDSLFS FNSSYNNSDV SQSMLTDEVV AGIFQDGSKQ  180
NWQNFKDESG IFQKGSKQNL ETQVPLTLLE NWLFDDANAQ TQEELMGIGV GMEWP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754421e-38HG975442.1 Solanum pennellii chromosome ch03, complete genome.
GenBankHG9755151e-38HG975515.1 Solanum lycopersicum chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019257201.15e-76PREDICTED: myb-related protein 306-like
TrEMBLA0A1J6IAZ11e-74A0A1J6IAZ1_NICAT; Transcription factor myb30
STRINGXP_009793069.13e-75(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.15e-28myb domain protein 60