PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00381g17007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 241aa    MW: 27812.1 Da    PI: 7.0584
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00381g17007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.5e-30157215159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               ldDg++WrKYG+K+vk+s++pr+YY+C+s +C+vkk+ver+++d ++v++tYeg Hnhe
  Peinf101Scf00381g17007.1 157 LDDGFKWRKYGKKMVKNSPNPRNYYKCSSGSCNVKKRVERDNDDSSYVITTYEGIHNHE 215
                               59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-32143217IPR003657WRKY domain
SuperFamilySSF1182901.26E-27150217IPR003657WRKY domain
PROSITE profilePS5081130.607152217IPR003657WRKY domain
SMARTSM007743.6E-35157216IPR003657WRKY domain
PfamPF031061.7E-23158215IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MDNIFSYSNP NPCNIGAIYS SNFIDAPEFE FSNYLFPEDG SSNNEDFLSQ NEMTCELVQS  60
ISSSGSSYSN NYPTPRTHNM QVLYKWLLSN TIHIIFQFLS FLCTFSLKIN VDDCSFVFFF  120
SSVCIVNRKC TKGVRKENKV ETKSRVAFRF KSDLDVLDDG FKWRKYGKKM VKNSPNPRNY  180
YKCSSGSCNV KKRVERDNDD SSYVITTYEG IHNHESPNYV LHYPQFPPNN NPTDGLHDLL  240
L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-241522171277Probable WRKY transcription factor 4
2lex_A6e-241522171277Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009779355.12e-77PREDICTED: probable WRKY transcription factor 50
RefseqXP_016509832.12e-77PREDICTED: probable WRKY transcription factor 50
TrEMBLA0A1S4D8U55e-76A0A1S4D8U5_TOBAC; probable WRKY transcription factor 50
TrEMBLA0A1U7WYP05e-76A0A1U7WYP0_NICSY; probable WRKY transcription factor 50
STRINGXP_009779355.18e-77(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21242462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.14e-38WRKY DNA-binding protein 51