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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Peinf101Scf00384g09018.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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| Family |
GRAS |
| Protein Properties |
Length: 468aa MW: 52114.8 Da PI: 4.953 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf00384g09018.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 334 | 2.8e-102 | 92 | 462 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklf 84
lv+lL+++Aea+++ + ela+ +L rl+elasp+g ++m+Rlaa+ft AL+a l + +k s+++++n+ ++laa++l+
Peinf101Scf00384g09018.1 92 LVHLLMAAAEALNK-SRELARVILVRLKELASPNGtTNMERLAAHFTDALQALLDG-----AKNNMFSKDEQQNQGDVLAAFQLL 170
689*******9987.789*****************889******************.....555556677778899********* PP
GRAS 85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg..skeeleetgerL 165
+++sP++kf+h+taNqaIleav +++r+Hi+D+di++G+QW++L+qaL sR+ ++ p+lRiT++++ +g s +++etg+rL
Peinf101Scf00384g09018.1 171 QDMSPFVKFGHFTANQAILEAVVHDRRIHIVDYDIMEGIQWASLMQALVSRKdgAPNPHLRITALSRCGNGrrSFGTVQETGRRL 255
****************************************************655677*********988898999********* PP
GRAS 166 akfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.n 249
+ fA+++g pf+f+ ++ e++++++L++ +gEal++n++l+l ++ + ++ + ++L k+l+P+++++ve+e++ +
Peinf101Scf00384g09018.1 256 TAFAASIGQPFSFHHCRLDTDETFKPSTLKLVRGEALIINCMLHLPHFSYR---ASDSIASFLTGCKTLNPRLLTLVEEELKPiG 337
***************9999***************************99843...3334569*******************9999* PP
GRAS 250 sesFlerflealeyysalfdsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332
+e F+ rf+++l++ysal+dslea++p +s ++r+ vEr++lg++i +a + + + e +W e+l + GF++ +s
Peinf101Scf00384g09018.1 338 DEGFVGRFMDTLHHYSALYDSLEAGFPLQStsSARALVERVFLGPRIIGSLARVYRT-IGEDE-RCSWGEWLADGGFRQSDISFA 420
*************************9977766*********************9998.33333.478****************** PP
GRAS 333 aakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
+ +qaklll ++ dgyrvee ++ lvlgWk r+L+s+S W+
Peinf101Scf00384g09018.1 421 NHCQAKLLLGLFN-DGYRVEEIaNNKLVLGWKCRRLLSASIWT 462
*************.******854999****************6 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MAMMVDETIQ DFDFYGCLST TTTTTTTTTS SENDNDHWDA FTDGDNFQDL IESMMLEVNH 60
SSELVGANAN TPPIISSDEE DESTEDFNGL KLVHLLMAAA EALNKSRELA RVILVRLKEL 120
ASPNGTTNME RLAAHFTDAL QALLDGAKNN MFSKDEQQNQ GDVLAAFQLL QDMSPFVKFG 180
HFTANQAILE AVVHDRRIHI VDYDIMEGIQ WASLMQALVS RKDGAPNPHL RITALSRCGN 240
GRRSFGTVQE TGRRLTAFAA SIGQPFSFHH CRLDTDETFK PSTLKLVRGE ALIINCMLHL 300
PHFSYRASDS IASFLTGCKT LNPRLLTLVE EELKPIGDEG FVGRFMDTLH HYSALYDSLE 360
AGFPLQSTSS ARALVERVFL GPRIIGSLAR VYRTIGEDER CSWGEWLADG GFRQSDISFA 420
NHCQAKLLLG LFNDGYRVEE IANNKLVLGW KCRRLLSASI WTTSDSDL
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
